Genome sequence and comparative analysis of DRQ-2, the type strain of Nonomuraea indica

Rao, Manik Prabhu Narsing; Dong, Zhou-Yan; Jiao, Jian-Yu; Zhou, Yu; Zhao, Jiao; Xiao, Min; Li, Wen-Jun

Abstract

Strain DRQ-2(T) (type strain of Nonomuraea indica) is worthy for genome sequencing, due to its ability to produce a wide variety of industrially important enzymes such as amylase, asparaginase, cellulase, gelatinase, glutaminase, and protease. Genome sequencing and comparison of strain DRQ-2(T) is described in the present work. The genome size was estimated to be 8,288,417 (bp) that consisted of 59 contigs. The G + C content of the genome was 72.4%. A total of 7730 genes were predicted with two rRNAs and 64 tRNAs. The genome analysis of the strain DRQ-2(T) showed the presence of a wide range of secondary metabolite gene clusters. Pan-Genomes Analysis Pipeline (PGAP) indicated that strain DRQ-2(T) had large numbers of unique genes. The majority of N. indica DRQ-2(T) genes encode for hypothetical proteins, indicating the functions of these ortholog clusters were still remain to be determined.

Más información

Título según WOS: ID WOS:000534479700019 Not found in local WOS DB
Título de la Revista: GENOMICS
Volumen: 112
Número: 4
Editorial: ACADEMIC PRESS INC ELSEVIER SCIENCE
Fecha de publicación: 2020
Página de inicio: 2842
Página final: 2844
DOI:

10.1016/j.ygeno.2020.03.023

Notas: ISI