Calcium (Ca2+) waves data calibration and analysis using image processing techniques
Abstract
Background: Calcium (Ca2+) propagates within tissues serving as an important information carrier. In particular, cilia beat frequency in oviduct cells is partially regulated by Ca2+ changes. Thus, measuring the calcium density and characterizing the traveling wave plays a key role in understanding biological phenomena. However, current methods to measure propagation velocities and other wave characteristics involve several manual or time-consuming procedures. This limits the amount of information that can be extracted, and the statistical quality of the analysis. Results: Our work provides a framework based on image processing procedures that enables a fast, automatic and robust characterization of data from two-filter fluorescence Ca2+ experiments. We calculate the mean velocity of the wave-front, and use theoretical models to extract meaningful parameters like wave amplitude, decay rate and time of excitation. Conclusions: Measurements done by different operators showed a high degree of reproducibility. This framework is also extended to a single filter fluorescence experiments, allowing higher sampling rates, and thus an increased accuracy in velocity measurements.
Más información
| Título según WOS: | Calcium (Ca2+) waves data calibration and analysis using image processing techniques |
| Título de la Revista: | BMC BIOINFORMATICS |
| Volumen: | 14 |
| Editorial: | BMC |
| Fecha de publicación: | 2013 |
| DOI: |
10.1186/1471-2105-14-162 |
| Notas: | ISI |