Information design of biological networks: application to genetic, immunologic, metabolic and social networks

Demongeot, J.; Pempelfort, H.; Martinez, J. M.; Vallejos, R; Barria, M.; Taramasco, C.; Barolli, L; Xhafa, F; Takizawa, M; Enokido, T; Hsu, HH

Abstract

The restitution of biological information in the framework of a new discipline, the information design, aims to develop new user-friendly tools for facilitating the comprehension of the medical or biological reality by a polymorphic end-user (patient, physician, or researcher in bioinformatics, biomathematics and life sciences). For that purpose, challenging problems will be presented: i) how to represent in a hierarchical way different components (uptrees, strong connected components, downtrees, ... ) of the biological network interaction graph, ii) how to describe the state dynamics on a network, with both its transient and asymptotic behaviours, iii) how to combine anatomic and functional information about nodes and edges of the interaction graph, and iv) how to take into account the evolutions of the architecture, notably the dynamics about the number of nodes and interaction links, e.g., in case of a rapid demographic change in social networks. Proposal of solutions will be presented for the two first challenges and some issues will be clarified for the two last ones.

Más información

Título según WOS: ID WOS:000327181600250 Not found in local WOS DB
Título de la Revista: 2013 IEEE 27TH INTERNATIONAL CONFERENCE ON ADVANCED INFORMATION NETWORKING AND APPLICATIONS WORKSHOPS (WAINA)
Editorial: IEEE
Fecha de publicación: 2013
Página de inicio: 1533
Página final: 1540
DOI:

10.1109/WAINA.2013.173

Notas: ISI