Supporting the classification of patients in public hospitals in Chile by designing, deploying and validating a system based on natural language processing
Abstract
Background: In Chile, a patient needing a specialty consultation or surgery has to first be referred by a general practitioner, then placed on a waiting list. The Explicit Health Guarantees (GES in Spanish) ensures, by law, the maximum time to solve 85 health problems. Usually, a health professional manually verifies if each referral, written in natural language, corresponds or not to a GES-covered disease. An error in this classification is catastrophic for patients, as it puts them on a non-prioritized waiting list, characterized by prolonged waiting times. Methods: To support the manual process, we developed and deployed a system that automatically classifies referrals as GES-covered or not using historical data. Our system is based on word embeddings specially trained for clinical text produced in Chile. We used a vector representation of the reason for referral and patient's age as features for training machine learning models using human-labeled historical data. We constructed a ground truth dataset combining classifications made by three healthcare experts, which was used to validate our results. Results: The best performing model over ground truth reached an AUC score of 0.94, with a weighted F1-score of 0.85 (0.87 in precision and 0.86 in recall). During seven months of continuous and voluntary use, the system has amended 87 patient misclassifications. Conclusion: This system is a result of a collaboration between technical and clinical experts, and the design of the classifier was custom-tailored for a hospital's clinical workflow, which encouraged the voluntary use of the platform. Our solution can be easily expanded across other hospitals since the registry is uniform in Chile.
Más información
| Título según WOS: | Supporting the classification of patients in public hospitals in Chile by designing, deploying and validating a system based on natural language processing |
| Título según SCOPUS: | Supporting the classification of patients in public hospitals in Chile by designing, deploying and validating a system based on natural language processing |
| Título de la Revista: | BMC Medical Informatics and Decision Making |
| Volumen: | 21 |
| Número: | 1 |
| Editorial: | BIOMED CENTRAL LTD |
| Fecha de publicación: | 2021 |
| Idioma: | English |
| DOI: |
10.1186/s12911-021-01565-z |
| Notas: | ISI, SCOPUS |