Atlas: automatic modeling of regulation of bacterial gene expression and metabolism using rule-based languages

Santibanez, Rodrigo; Garrido, Daniel; Martin, Alberto J. M.

Abstract

Motivation: Cells are complex systems composed of hundreds of genes whose products interact to produce elaborated behaviors. To control such behaviors, cells rely on transcription factors to regulate gene expression, and gene regulatory networks (GRNs) are employed to describe and understand such behavior. However, GRNs are static models, and dynamic models are difficult to obtain due to their size, complexity, stochastic dynamics and interactions with other cell processes.

Más información

Título según WOS: Atlas: automatic modeling of regulation of bacterial gene expression and metabolism using rule-based languages
Título de la Revista: BIOINFORMATICS
Volumen: 36
Número: 22-23
Editorial: OXFORD UNIV PRESS
Fecha de publicación: 2020
Página de inicio: 5473
Página final: 5480
DOI:

10.1093/BIOINFORMATICS/BTAA1040

Notas: ISI