Proteogenomic analysis in an early onset diffuse gastric cancer patient revealed alterations in PIK3R1, TP53, SMAD4 and a potential role of the PI3K-AKT and EGFR pathways: a case report

Cordova-Delgado, Miguel; Pinto, Mauricio P.; Gonzalo Pizarro; Koch C, Elard; Cristian Vargas; Mauricio Hernández; Nourdin-Galindo, Guillermo; Saldivia Pablo Flandez; Maria Paz Rodriguez Z; Alejandro Berkovits; Manque, Patricio; Juvenal A Ríos; Garcia-Bloj, Benjamin; Garrido, Marcelo

Keywords: smad4, case report, : Proteogenomics, early onset gastric cancer

Abstract

Background: Early-onset gastric cancers (EOGC) are poor prognosis hard-to treat malignancies that affect young individuals (<45 years old). Case Description: Herein we describe the case of a 26-year-old female EOGC patient that initially displayed stable disease after first-line CAPOX plus immunotherapy. However, patient eventually developed progressive disease and was consecutively switched to paclitaxel plus ramucirumab, and palliative irinotecan. In search for therapeutic alternatives a proteo-genomic analysis was performed in a tissue biopsy taken after the first progression. Our analyses found a total of 18 somatic mutations, including TP53 and PIK3R1, and a previously unreported germline alteration in the tumor suppressor SMAD4. Also, our proteomic analysis found 62 proteins previously documented as “enriched in stomach cancer” and AKT/mTOR and EGFR as pathways with therapeutic potential. Unfortunately, the clinical utility of AKT/mTOR inhibitors or EGFR targeted therapies could not be assessed. Conclusions: As explained above EOGC is a growing health concern that affects young individuals. Furthermore, the reported case displayed a poor response to standard therapy including checkpoint inhibitors and chemotherapy despite the presence of biomarkers that predict a favorable outcome. Future studies should adopt alternative approaches to find novel, more effective therapies.

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Título de la Revista: Journal of Gastrointestinal Oncology
Editorial: AME
Fecha de publicación: 2022
Idioma: Ingles
URL: https://jgo.amegroups.com/article/view/65385/html