Development of a PCR assay for the specific identification of the fish pathogen Tenacibaculum piscium

Saldarriaga-Cordoba, Monica; Araya-Leon, Henry; Irgang, Rute; Avendano-Herrera, Ruben

Abstract

Tenacibaculosis is an emerging disease that severely affects salmonid farming in Chile, producing high mortalities and causing great economic losses. This work describes a novel PCR assay for the specific detection of Tenacibaculum piscium, a species recently described and identified in tenacibaculosis outbreaks in Norway and Chile. The designed primers amplified a 678-bp fragment of the peptidase gene (peptidase M23 family) from T. piscium. This method is specific for T. piscium; no other chromosomal DNA amplification products were obtained for other Tenacibaculum species. In pure cultures, the PCR assay detected up to 500 pg of DNA, or the equivalent of 2.44 +/- 0.06 x 10(4) CFU/ml. For seeded fish samples (i.e., gills, liver, kidney, and mucus), the sensitivity limit was 4.88 +/- 0.11 x 10(6) CFU/g, sufficient to detect T. piscium in acute infections in fish. Notably, this sensitivity level was 100-fold lower for DNA extracted from mucus samples. As compared to other existing methodologies (e.g., gene sequencing), the PCR approach described in this work allowed for the easiest detection of T. piscium in mucus samples obtained from challenged fish, an important outcome considering that the identification of this bacterium is difficult. Our results indicate that the designed specific primers and PCR method provide a rapid and specific diagnosis of T. piscium.

Más información

Título según WOS: Development of a PCR assay for the specific identification of the fish pathogen Tenacibaculum piscium
Título de la Revista: JOURNAL OF FISH DISEASES
Volumen: 46
Número: 5
Editorial: Wiley
Fecha de publicación: 2023
Página de inicio: 517
Página final: 526
DOI:

10.1111/jfd.13764

Notas: ISI