Engineering the catalytic activity of an Antarctic PET-degrading enzyme by loop exchange

Blazquez-Sanchez, Paula; Vargas, Jhon A.; Furtado, Adriano A.; Grinen, Aransa; Leonardo, Diego; Sculaccio, Susana A.; Pereira, Humberto M.; Sonnendecker, Christian; Zimmermann, Wolfgang; Diez, Beatriz; Garratt, Richard; Acevedo, Waldo; Ramirez-Sarmiento, Cesar A.

Abstract

Several hydrolases have been described to degrade polyethylene terephthalate (PET) at moderate temperatures ranging from 25 degrees C to 40 degrees C. These mesophilic PET hydrolases (PETases) are less efficient in degrading this plastic polymer than their thermophilic homologs and have, therefore, been the subject of many protein engineering campaigns. However, enhancing their enzymatic activity through rational design or directed evolution poses a formidable challenge due to the need for exploring a large number of mutations. Additionally, evaluating the improvements in both activity and stability requires screening numerous variants, either individually or using high-throughput screening methods. Here, we utilize instead the design of chimeras as a protein engineering strategy to increase the activity and stability of Mors1, an Antarctic PETase active at 25 degrees C. First, we obtained the crystal structure of Mors1 at 1.6 A resolution, which we used as a scaffold for structure- and sequence-based chimeric design. Then, we designed a Mors1 chimera via loop exchange of a highly divergent active site loop from the thermophilic leaf-branch compost cutinase (LCC) into the equivalent region in Mors1. After restitution of an active site disulfide bond into this chimera, the enzyme exhibited a shift in optimal temperature for activity to 45 degrees C and an increase in fivefold in PET hydrolysis when compared with wild-type Mors1 at 25 degrees C. Our results serve as a proof of concept of the utility of chimeric design to further improve the activity and stability of PETases active at moderate temperatures.

Más información

Título según WOS: ID WOS:001058800300001 Not found in local WOS DB
Título según SCOPUS: ID SCOPUS_ID:85169160421 Not found in local SCOPUS DB
Título de la Revista: PROTEIN SCIENCE
Volumen: 32
Editorial: Wiley
Fecha de publicación: 2023
DOI:

10.1002/PRO.4757

Notas: ISI, SCOPUS