Genome sequence and comparative analysis of DRQ-2, the type strain of Nonomuraea indica
Abstract
Strain DRQ-2(T) (type strain of Nonomuraea indica) is worthy for genome sequencing, due to its ability to produce a wide variety of industrially important enzymes such as amylase, asparaginase, cellulase, gelatinase, glutaminase, and protease. Genome sequencing and comparison of strain DRQ-2(T) is described in the present work. The genome size was estimated to be 8,288,417 (bp) that consisted of 59 contigs. The G + C content of the genome was 72.4%. A total of 7730 genes were predicted with two rRNAs and 64 tRNAs. The genome analysis of the strain DRQ-2(T) showed the presence of a wide range of secondary metabolite gene clusters. Pan-Genomes Analysis Pipeline (PGAP) indicated that strain DRQ-2(T) had large numbers of unique genes. The majority of N. indica DRQ-2(T) genes encode for hypothetical proteins, indicating the functions of these ortholog clusters were still remain to be determined.
Más información
Título según WOS: | ID WOS:000534479700019 Not found in local WOS DB |
Título de la Revista: | GENOMICS |
Volumen: | 112 |
Número: | 4 |
Editorial: | ACADEMIC PRESS INC ELSEVIER SCIENCE |
Fecha de publicación: | 2020 |
Página de inicio: | 2842 |
Página final: | 2844 |
DOI: |
10.1016/j.ygeno.2020.03.023 |
Notas: | ISI |