Carrageenan from Gigartina skottsbergii: A Novel Molecular Probe to Detect SARS-CoV-2

Zank, Patricia Daiane; Cerveira, Milena Mattes; dos Santos, Victor Barboza; Klein, Vitor Pereira; de Souza, Thobias Toniolo; Bueno, Danielle Tapia; Poletti, Tais; Leitzke, Amanda Fonseca; Giongo, Janice Luehring; Carreno, Neftali Lenin Villarreal; Mansilla, Andres; Astorga-Espana, Maria Soledad; de Pereira, Claudio Martin Pereira; Vaucher, Rodrigo de Almeida

Abstract

The COVID-19 pandemic has caused an unprecedented health and economic crisis, highlighting the importance of developing new molecular tools to monitor and detect SARS-CoV-2. Hence, this study proposed to employ the carrageenan extracted from Gigartina skottsbergii algae as a probe for SARS-CoV-2 virus binding capacity and potential use in molecular methods. G. skottsbergii specimens were collected in the Chilean subantarctic ecoregion, and the carrageenan was extracted -using a modified version of Webber's method-, characterized, and quantified. After 24 h of incubation with an inactivated viral suspension, the carrageenan's capacity to bind SARS-CoV-2 was tested. The probe-bound viral RNA was quantified using the reverse transcription and reverse transcription loop-mediated isothermal amplification (RT-LAMP) methods. Our findings showed that carrageenan extraction from seaweed has a similar spectrum to commercial carrageenan, achieving an excellent proportion of binding to SARS-CoV-2, with a yield of 8.3%. Viral RNA was also detected in the RT-LAMP assay. This study shows, for the first time, the binding capacity of carrageenan extracted from G. skottsbergii, which proved to be a low-cost and highly efficient method of binding to SARS-CoV-2 viral particles.

Más información

Título según WOS: Carrageenan from Gigartina skottsbergii: A Novel Molecular Probe to Detect SARS-CoV-2
Título de la Revista: BIOSENSORS-BASEL
Volumen: 13
Número: 3
Editorial: MDPI
Fecha de publicación: 2023
DOI:

10.3390/bios13030378

Notas: ISI