Atom-based 3D-chiral quadratic indices. Part 2: Prediction of the corticosteroid-binding globulin binding affinity of the 31 benchmark steroids data set

Castillo-Garit, JA; Marrero-Ponce, Y; Torrens, F

Abstract

A quantitative structure-activity relationship (QSAR) study to predict the relative affinities of the steroid 'benchmark' data set to the corticosteroid-binding globulin (CBG) is described. It is shown that the 3D-chiral quadratic indices closely correlate with the measured CBG affinity values for the 31 steroids. The calculated descriptors were correlated with biological data through multiple linear regressions. Two statistically significant models were obtained when non-stochastic (R = 0.924 and s = 0.46) as well as stochastic (R = 0.929 and s = 0.46) 3D-chiral quadratic indices were used. A leave-one-out (LOO) approach to model validation is used here; the best results obtained in the cross-validation procedure with non-stochastic (q(2) = 0.781) and stochastic (q(2) = 0.735) 3D-chiral quadratic indices are better or similar to most of the 3D-QSAR approaches reported so far. These results support the idea that the 3D-chiral quadratic indices may be helpful in prediction of the corticosteroid-binding affinity for new compounds. (c) 2005 Elsevier Ltd. All rights reserved.

Más información

Título según WOS: ID WOS:000236015000025 Not found in local WOS DB
Título de la Revista: BIOORGANIC & MEDICINAL CHEMISTRY
Volumen: 14
Número: 7
Editorial: PERGAMON-ELSEVIER SCIENCE LTD
Fecha de publicación: 2006
Página de inicio: 2398
Página final: 2408
DOI:

10.1016/j.bmc.2005.11.024

Notas: ISI