Nucleotide Exchange Mechanism Involving Angle-Dependent Rate Constants Extracted from F1-ATPase Single-Molecule Rotation Trajectories

Volkan-Kacso, Sandor; Matute, Ricardo A.; Michel-Beyerle, Maria-Elisabeth; Khatchikian, Oganes; Marcus, Rudolph A.

Abstract

Evidence has been mounting that in the rotational cycle of F1-ATPase there is a concerted ATP binding and ADP release that yields a million-fold acceleration in the rate of the product ADP release. We developed a theory of reaction kinetics to investigate the relationship between the concerted nucleotide exchange and previous single-molecule forced rotation data from . We extracted from these data angle-dependent rate constants for nucleotide binding and release. The rate constants were then used in a unified kinetic scheme, also consistent with other single-molecule and ensemble experiments, to obtain analytical equations for nucleotide occupancy change events from nano- to millimolar ATP concentrations. A theory-experiment comparison revealed novel evidence about the concerted mechanism: it is determined by correlated conformational changes in the F1-ATPase ring, and its kinetic signature is a unified angle-dependent function of the nucleotide binding and release rate constants, which is independent of ATP concentration.

Más información

Título según WOS: ID WOS:001611278400001 Not found in local WOS DB
Título de la Revista: JOURNAL OF PHYSICAL CHEMISTRY B
Editorial: AMER CHEMICAL SOC
Fecha de publicación: 2025
DOI:

10.1021/acs.jpcb.5c04403

Notas: ISI