Man

timothy james rudge

assistant professor

universidad catolica de chile

santiago, Chile

Líneas de Investigación


synthetic biology; computational biology; bioengineering; Mechanobiology

Educación

  •  doctor of philosophy, UNIVERSITY OF CAMBRIDGE. Reino Unido, 2015
  •  computer vision, image processing, graphics and simulation, UNIVERSITY COLLEGE LONDON. Reino Unido, 2002
  •  mechatronics, UNIVERSITY OF LEEDS. Reino Unido, 1998

Experiencia Académica

  •   assistant professor Full Time

    PONTIFICIA UNIVERSIDAD CATOLICA DE CHILE

    Instituto de Ingenieria Biologica y Medica

    santiago, Chile

    2016 - At present

Experiencia Profesional

  •   post-doc Full Time

    university of cambridge

    Reino Unido

    2014 - 2016

  •   research associate Full Time

    university college london

    Reino Unido

    2009 - 2010

  •   research associate Full Time

    university of queensland

    Australia

    2004 - 2006

  •   research assistant Full Time

    university of cambridge

    Reino Unido

    2002 - 2004

  •   Investigador asociado Part Time

    Fondecyt Regular (Mario Vera)

    Chile

    2019 - At present

  •   Investigador associado Part Time

    Fondecyt Regular (Veronica Eisner)

    Chile

    2019 - At present

  •   profesor asistente Full Time

    universidad catolica de chile

    santiago, Chile

    2016 - At present

  •   investigador responsable Full Time

    fondecyt de iniciación

    Chile

    2016 - 2019

Formación de Capital Humano


Alumnnos graduados:

Isaac Nuñez, Magister, graduado 2017
Tamara Matute, Magister, graduado 2017
Macarena Muñoz, Magister, graduado 2019
Ignacio Medina, Practica en fisica, graduado 2019
Sebastian Urrejola, Investigacion en pregrado, terminado 2019
Sebastian Urrejola, Practica en física, terminado 2019
Ignacio Medina, Investigacion en pregrado, terminado 2019
Ignacio Medina, Practica en física, terminado 2019
Ambrosio Valdes, Investigacion en pregrado, terminado 2017
Carlos Ruiz, Investigacion en pregrado, terminado 2017
Gabriela Retamales, Investigacion en pregrado, terminado 2017
Sofia Figueroa, Investigacion en pregrado, ingreso 2019
Daniela Barrera, Investigacion en pregrado, ingreso 2019

Alumnos supervisados actualmente:

Isaac Nuñez, Doctorado, ingreso 2018
Tamara Matute, Doctorado, ingreso 2018
Gonzalo Vidal, Doctorado, ingreso 2019
Guillermo Yañez, Doctorado, ingreso 2019
Geraldine Aedo, Doctorado, ingreso 2019
Emily Skog, Investigacion en pregrado, ingreso 2020
Verner Codoceo, Investigacion en pregrado, ingreso 2019
Benjamin Earleman, Investigacion en pregrado, ingreso 2019


Difusión y Transferencia


Workshop Synthetic Biology, Universidad Austral, Valdivia, 2017
Workshop Synthetic Biology, Universidad Austral, Valdivia, 2018
Book chapter, https://doi.org/10.1201/9780429461385


Premios y Distinciones

  •   Public Library of Science Best Open Hardware Project

    Public Library of Science (PLoS)

    Estados Unidos, 2017

    Annual prize for the best project developing open source hardware designs, for our work making a low cost fluorescence imaging system.


 

Article (32)

An equilibrium model for ribosome competition
Cohesive energy and interaction of superparamagnetic aggregates
Flapjack: Data Management and Analysis for Genetic Circuit Characterization
Novel tunable spatio-temporal patterns from a simple genetic oscillator circuit
Intercellular adhesion promotes clonal mixing in growing bacterial populations
Intercellular adhesion promotes clonal mixing in growing bacterial populations
Artificial Symmetry-Breaking for Morphogenetic Engineering Bacterial Colonies
Artificial Symmetry-Breaking for Morphogenetic Engineering Bacterial Colonies.
Low cost and open source multi-fluorescence imaging system for teaching and research in biology and bioengineering
Low cost and open source multi-fluorescence imaging system for teaching and research in biology and bioengineering
Characterization of Intrinsic Properties of Promoters
Characterization of Intrinsic Properties of Promoters
Characterization of Intrinsic Properties of Promoters
Characterization of Intrinsic Properties of Promoters.
Orthogonal intercellular signaling for programmed spatial behavior
Orthogonal intercellular signaling for programmed spatial behavior
Orthogonal intercellular signaling for programmed spatial behavior.
Cell Polarity-Driven Instability Generates Self-Organized, Fractal Patterning of Cell Layers
Cell Polarity-Driven Instability Generates Self-Organized, Fractal Patterning of Cell Layers
Synthetic Biology: opportunities for Chilean bioindustry and education
Synthetic Biology: opportunities for Chilean bioindustry and education
Wavelet-based data and solution compression for efficient image reconstruction in fluorescence diffuse optical tomography
Wavelet-based data and solution compression for efficient image reconstruction in fluorescence diffuse optical tomography
Computational Modeling of Synthetic Microbial Biofilms
Computational Modeling of Synthetic Microbial Biofilms
Fast image reconstruction in fluoresence optical tomography using data compression
Fast image reconstruction in fluoresence optical tomography using data compression
Full-wavelet approach for fluorescence diffuse optical tomography with structured illumination
A system for modelling cell-cell interactions during plant morphogenesis
A system for modelling cell-cell interactions during plant morphogenesis.
Effects of intrinsic and extrinsic noise can accelerate juxtacrine pattern formation
Effects of intrinsic and extrinsic noise can accelerate juxtacrine pattern formation.

BookSection (1)

Scanning Angle Interference Microscopy (SAIM)

ConferencePaper (1)

Efficient image reconstruction in fluorescence diffuse opitcal tomography (fDOT) using data and solution compression

Proyecto (7)

Mechanical constraints induce traveling waves of gene expression in cell colonies
Multiscale dynamics and active matter processes regulate tensional homeostasis of cellu-lar aggregates
Spatial Biology of Synthetic Genetic Networks
Multiscale mechanics and self-organizing processes in developing systems
Role of mitochondrial inner membrane and mtDNA dynamics on mitochondrial bioenergetics in health and disease
Through a rational design of bioleaching consortia=> Plattform for biofilm-metal sulfide surface interactions, and high troughput selective imaging of mixed species biofilms
SPATIO-TEMPORAL DYNAMICS OF DRIVEN SYNTHETIC GENE NETWORKS IN BACTERIAL POPULATIONS
23
timothy rudge

assistant professor

Instituto de ingenieria biologica y medica

universidad catolica de chile

santiago, Chile

5
Fernan Federici

Assistant Professor

Genetica Molecular y Microbiologia

Pontificia Universidad Catolica de Chile

Santiago, Chile

1
Bernardo Pollak

Fundador y CEO

Multiplex SpA

Santiago, Chile

1
Andrea Ravasio

Assistant Professor

Instituto de Ingeniería Biológica y Médica

Pontificia Universidad Católica de Chile

Santiago, Chile

1
Nicolás Rojas

Research Associate

Schools of Engineering, Biology and Medicine

Pontificia Universidad Católica de Chile

Santiago, Chile