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Andrea Isabel Moreno Switt

Profesor Asociado

Pontificia Universidad Católica de Chile

SANTIAGO, Chile

Líneas de Investigación


My research interest is in foodborne pathogens transmission from farm to fork with emphasis in food animals as source of Salmonella and Listeria and as source of multidrug resistant bacteria.

Educación

  •  Food Science and Technology, CORNELL UNIVERSITY. Estados Unidos, 2013
  •  Microbiology, UNIVERSIDAD DE CONCEPCION. Chile, 2007
  •  Médico Veterinario, UNIVERSIDAD DE CONCEPCION. Chile, 2001

Experiencia Académica

  •   PROFESOR ASISTENTE Full Time

    UNIVERSIDAD ANDRES BELLO

    ECOLOGIA Y RECURSOS NATURALES

    SANTIAGO, Chile

    2014 - 2020

  •   Postdoctorate Associate Full Time

    CORNELL UNIVERSITY

    Ithaca, Estados Unidos

    2012 - 2014

  •   Research Assistant Full Time

    co

    Ithaca, Chile

    2009 - 2012

  •   Profesor Asociado Full Time

    PONTIFICIA UNIVERSIDAD CATOLICA DE CHILE

    Santiago, Chile

    2020 - At present

Experiencia Profesional

  •   Postdoctoral Associate Full Time

    Cornell University

    Ithaca, Estados Unidos

    2012 - 2014

  •   Profesor Asistente Full Time

    Universidad Andrés Bello

    Santiago, Chile

    2014 - 2020

  •   Profesor Asistente Full Time

    Pontificia Universidad Católica

    Santiago, Chile

    2020 - At present

Formación de Capital Humano


Postdocs
• Alejandro Pina (2023-2026), ANID Fondecyt Postdoctoral Fellow.
• Diana Álvarez (2020-2023), ANID Fondecyt Postdoctoral Fellow, EMBO TRAVEL grant 2023 Awarded, CELFI travel Grant Awarded. Internship conducted at the College of Veterinary Medicine, University of Minnesota, USA.
• Roberto Riquelme (2018-2019), ANID Fondef Postdoctoral Fellow

PhD
Completed
Paula Soza (2015-2018). Defended on May 29th, 2018.
Thesis tittle: Identification and Characterization of the Presence of Salmonella Strains and Methicillin Resistant Staphylococcus aureus (MRSA) in an Equine Hospital in Chile.
Program: Doctorate in Veterinary Medicine, Universidad Andres Bello

Viviana Toledo (2014-2019). Defended on December 16th, 2019.
Program: Doctorate in Veterinary Medicine, Universidad Andres Bello
Thesis tittle: Identification of phenotypic and genomic differences in lineages of strains of Listeria monocytogenes isolated from listeriosis, food and food processing plants
Recipient CELFI (Latin-American center for interdisciplinary study) travel grant

Rodolfo Tardone (2015-2021). Defended on January 26th, 2021
Program: Doctorate in Veterinary Medicine, Universidad Andres Bello
Thesis tittle: Comparative genomic study of Salmonella and Salmonella phages isolated from backyard flocks and adjacent wild birds
Currently: Research Professor at Universidad de las Américas

Sebastián Guerra (2015-2021). Defended on February 24th, 2021
Program: Doctorate in Veterinary Medicine, Universidad Andres Bello
Thesis tittle: Characterization, comparison, and prevalence of black pigmented bacteria in healthy horses and with periodontal disease, as well as estimation of risk factors

Fernando Dueñas (2015-2020). Defender on April 22nd, 2020
Program: Doctorate in Veterinary Medicine, Universidad Andres Bello
Thesis tittle: Characterization of the diversity of Salmonella bacteriophages isolated in backyard bovine productions.
Currently: Assistant Professor, Universidad Bernardo O´higgins

Frederick Toro (2016-2020). Defended on April 15th, 2020.
Doctorate in Conservation Medicine, Universidad Andres Bello
Thesis tittle: Evaluation of the health status of humpback whales (Megaptera novaengliae) off the coast of Chile.

Dácil Rivera (2015-2021). Defended on March 16th, 2021.
Program: Doctorate in Food and Nutrition, Universidad de Chile (Co-advice with Dr. Luis Lopez)
Thesis tittle: Effectiveness of bacteriophages of wide range host isolated from backyard farms as biocontrol Salmonella Infantis
Recipient CONICYT scholarship 2015-to 2020.
Recipient CELFI (Latin-American center for interdisciplinary study) travel grant
Recipient EMBO Workshop Viruses of Microbes 2018 travel grant
Recipient CONICYT grant to attend to an international conference 2018.
Recipient of Ever Green Phage Meeting Travel Award 2019
IAFP travel grant for 2020 annual meeting.
Currently: Assistant Professor, Universidad Andres Bello

Marilia Salgado (2017-2020). Defended on September 28th, 2020.
Program: Doctorate in Veterinary Medicine, Universidade Estadual Paulista, Botucatu, Brazil
Thesis tittle: Prevalence, risk factors, and viral infections associated with extended-spectrum cephalosporin-resistant Escherichia coli in dogs.

Constanza Díaz (2019-2024). Defended on February, 2024.
Program: Doctorate in Molecular Bioscience, Universidad Andres Bello
Thesis tittle: Dynamics of resistance and virulence gene transmission on E. coli from distinct environment in a same community in the Maule Region.

Current
Francisca Álvarez (2020-Present)
Program: Doctorate in Biotechnology, Universidad Andres Bello
Recipient of travel grant from Inofood meeting, 2022
Thesis tittle: Development of a PCR method to detect MDR and ESBL producer Salmonella in agricultural waters.

Rocío Barrón (2022-Present)
Program: PhD in Medical and biological Engineering, Pontificia Universidad Católica de Chile
ISVM TRAVEL grant 2022 Awarded, ANID scholarships awarded.
Thesis tittle: An editable coating supplemented with bacteriophage targeting Salmonella Infantis MDR in raw chicken meats.

Gabriel Paba Calderón, co-adviser (2022-Present)
Program: PhD in Plant Biotechnology, Pontificia Universidad Católica de Chile
Thesis tittle: Biological and molecular characterization of lytic bacteriophages to control Xanthomonas campestris pv. campestris in cabbage plants susceptible to black rot

María José Navarrete (2024-Present)
Program: Doctorate in Engineering and Science with the Industry, Pontificia Universidad Católica de Chile
Thesis: tbd

Masters
Completed
Rocío Barrón (2019-2021)
Title: Mathematical model of the lytic capability of phage infection on a model of Salmonella Infantis
MS in Microbiology, University of Concepcion
Recipient of travel grant from IAFP-Inofood meeting, 2020

Undergraduate thesis, Academic Advisees
• Guillermo Aravena (2015), School of Veterinary Medicine, Universidad Andres Bello
• Leonardo Valdebenito (2016), School of Veterinary Medicine, Universidad Andres Bello
• Fanny Pizarro (2017), School of Veterinary Medicine, Universidad Andres Bello
• María Jesús Serrano (2017), School of Veterinary Medicine, Universidad Andres Bello
• Camila García (2018), School of Veterinary Medicine, Universidad Andres Bello
• Catalina Millard (2018), School of Veterinary Medicine, Universidad Andres Bello
• Camila Flores (2018), School of Veterinary Medicine, Universidad Andres Bello
• Luana Reichert (2019-2020), School of Engineer in Biotechnology, Universidad Andres Bello
• Chantal Arcos (2019-2020), School of Engineer in Biotechnology, Universidad Andres Bello
• Josefina Miranda Riveros (2023), School of Biotechnology, Universidad Mayor, Chile
• Marcia Suárez Guerrero (2023), School of Biochemist, Universidad Andres Bello


Difusión y Transferencia


Workshops:
1. Visiting Instructor at workshop on molecular epidemiology conducted at University of Concepcion, Chile. Jan 2010
2. Coordinator and instructor at workshop in molecular epidemiology at Universidad Andres Bello, Chile, Jan 2015
3. Vice-president at the First International Symposium on Food Safety, conference sponsored by OECD, Dec 2016


Premios y Distinciones

  •   IAFP Developing scientist competition

    International Association for Food Protection

    Estados Unidos, 2012

    Third place in Poster Competition

  •   ASM travel Grant

    American Society for Microbiology

    Chile, 2011

    Travel Grant


 

Article (77)

A multicenter genomic epidemiological investigation in Brazil, Chile, and Mexico reveals the diversity and persistence of <i>Salmonella</i> populations in surface waters
Exploring the genomic and antimicrobial resistance tapestry: comparative insights into <i>Salmonella enterica</i> serotypes Agona, Braenderup, Muenchen, and Panama in Latin American surface waters
Genomic analysis of <i>Salmonella</i> isolated from surface water and animal sources in Chile reveals new T6SS effector protein candidates
Genomic characterisation of the population structure and antibiotic resistance of<i> Salmonella</i><i> enterica</i> serovar Infantis in Chile, 2009-2022
Identification and Characterization of <i>Salmonella</i> Phages and Absence of <i>Salmonella</i> Strains from Three Different Study Areas of Cattle Livestock
Integrative genome-centric metagenomics for surface water surveillance: Elucidating microbiomes, antimicrobial resistance, and their associations
Unveiling the genomic landscape of <i>Salmonella enterica</i> serotypes Typhimurium, Newport, and Infantis in Latin American surface waters: a comparative analysis
Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee
ECOPHAGE: Combating Antimicrobial Resistance Using Bacteriophages for Eco-Sustainable Agriculture and Food Systems
Biogeographical variation in antimicrobial resistance in rivers is influenced by agriculture and is spread through bacteriophages
Funding "This publication is supported by the Food and Drug Administration (FDA) of the US Department of Health and Human Services (HHS) as part of an award totaling $100,000 with 0% percent financed with non- governmental sources. The contents are those of the author(s) and do not necessarily represent the official views of, nor an endorsement, by FDA, HHS, or the US Government. For more information, please visit FDA. gov."
Humans and Hoofed Livestock Are the Main Sources of Fecal Contamination of Rivers Used for Crop Irrigation: A Microbial Source Tracking Approach
Identification of Type VI Secretion Systems Effector Proteins That Contribute to Interbacterial Competition in Salmonella Dublin
Long-Term Interactions of Salmonella Enteritidis With a Lytic Phage for 21 Days in High Nutrients Media
Mec-Positive Staphylococcus Healthcare-Associated Infections Presenting High Transmission Risks for Antimicrobial-Resistant Strains in an Equine Hospital
Novel <i>Salmonella</i> Phage, vB_Sen_STGO-35-1, Characterization and Evaluation in Chicken Meat
Revisiting the Biological Behavior of <i>Salmonella enterica</i> in Hydric Resources: A Meta-Analysis Study Addressing the Critical Role of Environmental Water on Food Safety and Public Health
Antimicrobial resistance in wildlife and in the built environment in a wildlife rehabilitation center
Bacterial Viruses Subcommittee and Archaeal Viruses Subcommittee of the ICTV: update of taxonomy changes in 2021
Comparative analysis of Felixounavirus genomes including two new members of the genus that infect Salmonella infantis
Composition and structure of the skin microbiota of rorquals off the Eastern South Pacific
Diversity of Non-O157 Shiga Toxin-Producing Escherichia coli Isolated from Cattle from Central and Southern Chile
Global prevalence and molecular characterization of extended-spectrum beta-lactamase producing-Escherichia coli in dogs and cats - A scoping review and meta-analysis
Higher Prevalence of Extended-Spectrum Cephalosporin-Resistant Enterobacterales in Dogs Attended for Enteric Viruses in Brazil Before and After Treatment with Cephalosporins
Isolation and engineering of a Listeria grayi bacteriophage
Isolation of Ciprofloxacin and Ceftazidime-Resistant Enterobacterales From Vegetables and River Water Is Strongly Associated With the Season and the Sample Type
Perspective on Clinically-Relevant Antimicrobial Resistant Enterobacterales in Food: Closing the Gaps Using Genomics
Risk factors associated with faecal carriage of extended-spectrum cephalosporin-resistant Escherichia coli among dogs in Southeast Brazil
Screening the Presence of Non-Typhoidal Salmonella in Different Animal Systems and the Assessment of Antimicrobial Resistance
Antimicrobial Resistance in Water in Latin America and the Caribbean: Available Research and Gaps
Salmonella in Raptors and Aquatic Wild Birds in Chile
Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee
The COVID-19 Pandemic and Global Food Security
Tracing Listeria monocytogenes contamination in artisanal cheese to the processing environments in cheese producers in southern Chile
Widespread Environmental Presence of Multidrug-ResistantSalmonellain an Equine Veterinary Hospital That Received Local and International Horses
Antimicrobial resistance in water in Latin America and the Caribbean: a scoping review protocol
Lysis Profiles of Salmonella Phages on Salmonella Isolates from Various Sources and Efficiency of a Phage Cocktail against S. Enteritidis and S. Typhimurium
Transduction as a Potential Dissemination Mechanism of a Clonal qnrB19-Carrying Plasmid Isolated From Salmonella of Multiple Serotypes and Isolation Sources
Two Phages of the Genera Felixunavirus Subjected to 12 Hour Challenge on Salmonella Infantis Showed Distinct Genotypic and Phenotypic Changes
Approaches to empower the implementation of new tools to detect and prevent foodborne pathogens in food processing
Backyard farms represent a source of wide host range Salmonella phages that lysed the most common Salmonella serovars
Genomic Diversity of Listeria monocytogenes Isolated from Clinical and non-clinical Samples in Chile
Genomics of Salmonella contaminating backyard production systems reveals persistence and transmission of genetically related Salmonella on a farm basis
Genomics of Salmonella Contaminating Backyard Production Systems Reveals Persistence and Transmission of Genetically-Related Salmonella on a Farm Basis
Preface: New Tools to detect and Prevent Foodborne Outbreaks from Farm to Fork
Taxonomy of prokaryotic viruses=> 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee
Characterization of Four Novel Bacteriophages Isolated from British Columbia for Control of Non-typhoidal Salmonella in Vitro and on Sprouting Alfalfa Seeds
Characterization of Salmonella phages from dairy calves on farms with history of diarrhea
Emerging needs and opportunities in foodborne disease detection and prevention: From tools to people
First detection and characterization of Salmonella spp. in poultry and swine raised in backyard production systems in central Chile
Food safety trends: from globalization of whole genome sequencing to application of new tools to prevent foodborne diseases
Infectology in the genomics era
A proposed new bacteriophage subfamily: "Jerseyvirinae"
Salmonella phages and prophages: genomics, taxonomy, and applied aspects.
Taxonomic reassessment of N4-like viruses using comparative genomics and proteomics suggests a new subfamily - "Enquartavirinae".
Genomic characterization of Salmonella Cerro ST367, an emerging Salmonella subtype in cattle in the United States
Genomic comparison of sporeforming bacilli isolated from milk.
Omics approaches in food safety: fulfilling the promise?
Salmonella phages isolated from dairy farms in Thailand show wider host range than a comparable set of phages isolated from U.S. dairy farms
Comparison of typing methods with a new procedure based on sequence characterization for Salmonella serovar prediction.
Genomic characterization provides new insight into Salmonella phage diversity.
Molecular methods for serovar determination of Salmonella.
Salmonella bacteriophage diversity reflects host diversity on dairy farms.
Identification and characterization of novel Salmonella mobile elements involved in the dissemination of genes linked to virulence and transmission.
Silage collected from dairy farms harbors an abundance of listeriaphages with considerable host range and genome size diversity.
A whole genome SNP based approach to trace and identify outbreaks linked to a common Salmonella enterica subsp. enterica serovar Montevideo Pulsed Field Gel Electrophoresis type.
Animal contact as a source of human non-typhoidal salmonellosis.
Diverse geno- and phenotypes of persistent Listeria monocytogenes isolates from fermented meat sausage production facilities in Portugal.
Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica
Salmonella Cerro isolated over the past twenty years from various sources in the US represent a single predominant pulsed-field gel electrophoresis type.
Temporal clusters of bovine Salmonella cases at a veterinary medical teaching hospital, 1996-2007.
Emergence, distribution, and molecular and phenotypic characteristics of Salmonella enterica serotype 4,5,12:i:-.
Salmonella enterica serotype 4,5,12:i:-, an emerging Salmonella serotype that represents multiple distinct clones.
Extended-spectrum beta-lactamases belonging to CTX-M group produced by Escherichia coli strains isolated from companion animals treated with enrofloxacin.
Comparative genomic and morphological analysis of Listeria phages isolated from farm environments
Genomic analysis reveals that Salmonella Cerro ST367, an emerging Salmonella subtype in cattle is characterized by a premature stop codon in sopA, which is required for virulence
Revisiting the biological behavior of Salmonella enterica in hydric resources: a meta-analysis study addressing the critical role of environmental water on food safety and public health

BookWhole (1)

Salmonella phages and prophages: Genomics, taxonomy, and applied aspects

Letter (1)

Salmonella enterica Serovar Abony Outbreak Caused by Clone of Reference Strain WDCM 00029, Chile, 2024

Proyecto (24)

Advancing early microbiological control of Salmonella in poultry meat production: development of a serotype-specific environmental surveillance system using infrared spectroscopy.
Phenotypic and genomic characterization of the interactions between multidrug resistant Salmonella Infantis and distinct lytic bacteriophages with biocontrol potential
Emergent multidrug-resistant Salmonella Infantis in food animals: understanding dissemination, reservoirs, and genomic features facilitating its emergence
PhageStop, a formulation of a cocktail of different bacteriophages with lytic activity of precision against MDR Salmonella Infantis in chicken meat
Effect of bacteriophage treatment against Salmonella Infantis in the host inflammatory response and broiler chicken microbiota.
Cooperative Agreement to Support the Joint Institute for Food Safety and Applied Nutrition (JIFSAN).
FageCapsuleS, an encapsulated phage cocktail with small and large gut delivery to control Salmonella in chickens
Cooperative Agreement to Support the Joint Institute for Food Safety and Applied Nutrition (JIFSAN).
FageCapsuleS, an encapsulated phage cocktail with small and large gut delivery to control Salmonella in chickens.
Millennium Initiative for Collaborative Research on Bacterial Resistance (MICROB-R)
Salmonella-bacteriophage coevolution and their genetic modifications during lifestyle cycles of Salmonella on non-host (water and soil) and host environments (chickens)
Salmonella-bacteriophage coevolution and their genetic modifications during lifestyle cycles of Salmonella on non-host (water and soil) and host environments (chickens)
Risk assessment model regarding norovirus contamination on berries produced in Chile
Inmovilización de bacteriófagos de Salmonella Enteritidis sobre una película de quitosano, modelo in vitro y en el alimento
International Symposium on Food Safety (ISFS)=> New Tools to Detect and Prevent Foodborne Outbreaks from Farm to Fork
Programa de Buenas prácticas en la producción de quesos artesanales en la Región de los Ríos
Identification of phenotypic and genomic differences among Listeria monocytogenes lineages isolated from clinical cases, foods and food processing plants
Improving Global Food Safety by Molecular Detection and Big Data Analysis
Whole genome sequencing of Salmonella enterica (various serovars) and Listeria monocytogenes from international sources and diverse host and environment origins"
Genetic Diversity of Salmonella phage and CRISPR spacer arrays as a signature of Salmonella animal origin
Genetic Diversity of Salmonella phage and CRISPR spacer arrays as a signature of Salmonella animal origin
Improving Global Food Safety by Molecular Detection and Big Data Analysis
Bacteriophage Effects on Salmonella Shedding
Phenotypic and molecular studies to facilitate improved control of L. monocytogenes and Salmonella transmission=> Food safety research consortium, NY

Review (1)

A review of the global emergence of multidrug-resistant<i> Salmonella</i><i> enterica</i> subsp.<i> enterica</i> Serovar Infantis
3
Gerardo Gonzalez

Full Professor

Microbiology

UNIVERSIDAD DE CONCEPCION

Concepcion, Chile

1
Patricio Retamal

Profesor Asociado

Medicina Preventiva Animal

FACULTAD DE CIENCIAS VETERINARIAS Y PECUARIAS, UNIVERSIDAD DE CHILE

Santiago, Chile

3
Patricia García

Jefe de Laboratorio de Microbiologia

Escuela de Medicina

PONTIFICIA UNIVERSIDAD CATOLICA DE CHILE, LABORATORIO DE MICROBIOLOGÍA

Santiago, Chile

1
Carlos Blondel

Profesor Asistente

Instituto de Ciencias Biomédicas

Universidad Andrés Bello

Santiago, Chile

6
Christopher Hamilton-West

Profesor Titular

FACULTAD DE CIENCIAS VETERINARIAS Y PECUARIAS, UNIVERSIDAD DE CHILE

Santiago, Chile

5
Angelica Reyes

Profesor Asociado

INTA UNIVERSIDAD DE CHILE

Santiago, Chile

2
SANDRA CORTES

ASSOCIATED PROFESSOR

PUBLIC HEALTH

PONTIFICIA UNIVERSIDAD CATOLICA DE CHILE

SANTIAGO, Chile

3
Jorge Olivares

Profesor Asociado

Biology

Pontificia Universidad Católica de Valparaíso

Valparaíso, Chile

2
Andres Opazo

Profesor Asistente

Microbiología

Universidad de Concepción

Concepción, Chile

3
Fernando Mardones

Profesor Asistente

Medicina

Universidad Católica de Chile

Santiago, Chile

3
Magaly Toro

Profesor Asistente

UNIVERSIDAD DE CHILE

Chile

1
Paulina Bahamonde

Profesora Asistente

Centro Resiliencia, Adaptación y Mitigación

Universidad Mayor de Chile

TEMUCO, Chile

13
Aiko Adell

Profesor Asociado

Universidad Andrés Bello

Santiago, Chile

2
Jose Munita

Profesor Asociado

Internal Medicine

FACULTAD DE MEDICINA CLINICA ALEMANA- UNIVERSIDAD DEL DESARROLLO

Santiago, Chile

2
Eduardo Castro

Associate Professor

Departamento de Microbiología

Universidad de Talca

Talca, Chile

3
Paola Navarrete

Associate Professor

INTA

Universidad de Chile

Santiago, Chile

1
Dácil Rivera

Profesor Asistente

Laboratorio de microbiologia, campus Colina

Universidad Andrés Bello

Santiago, Chile

1
Roberto Bastías

Profesor

Facultad de Ciencias

Pontificia Universidad Católica de Valparaíso

Valparaíso, Chile

1
Reinaldo Campos

Titular Professor

Producción Agrícola

Universidad de Chile

Santiago, Chile

61
Andrea Moreno

Profesor Asociado

Pontificia Universidad Católica de Chile

SANTIAGO, Chile

1
Raúl Alegría

Apoyo Docente

Medicina Preventiva Animal

Facultad de Ciencias Veterinarias y Pecuarias - Universidad de Chile

Santiago, Chile

2
Luis Piña

Investigador Postdoctoral

Genética Molecular y Microbiología

Pontificia Universidad Católica de Chile

Santiago, Chile

1
Rafael Araos

Principal Investigator

Universidad del De

Santiago, Chile

1
Soledad Ulloa

Jefa de departamento

Diagnóstico Molecular

PhageLab Chile

Santiago, Chile

1
Jorge Fernandez

JEFE SUBDEPTO

BIOMEDICO NACIONAL Y DE REFERENCIA

INSTITUTO DE SALUD PUBLICA

santiago, Chile

3
DIANA ALVAREZ

Profesora Asistente

Pontificia Universidad Católica de Chile

Santiago de Chile, Chile

1
Soledad Ruiz

Académica Investigadora

Facultad de Recursos Natrurales y Medicina Veterinaria

Universidad Santo Tomas

Santiago, Chile

1
Roberto Riquelme

Académico Investigador

Universidad de Las Américas

Santiago, Chile

2
Fernando Dueñas

Profesor Part Time

Ciencias de la Vida

Universidad Andrés Bello

Santiago de Chile, Chile