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Herman Silva Ascencio

Professor

Universidad de Chile

Santiago, Chile

Functional Genomics and Bioinformatics in plant species of agronomic interest: a) understand how plants respond to abiotic stress; b) comparative genomics to understand the accumulation of bioactive compounds; c) identification of molecular markers.

Licenciate in Biochemistry, UNIVERSIDAD DE CONCEPCION. Chile, 1987
Biochemist, UNIVERSIDAD DE CONCEPCION. Chile, 1988
Ph. D., Plant Biology, Rutgers, The State University of New Jersey. Estados Unidos, 1998

Professor Full Time

UNIVERSIDAD DE CHILE

Facultad de Ciencias Agronomicas

Santiago, Chile

2015 - At present

Associate Professor Full Time

Universidad Andres Bello

Santiago, Chile

2005 - 2010
Assistant Professor Full Time

Universidad de Chile

Santiago, Chile

1999 - 2005
Ph. D. Student Full Time

Rutgers University

New Brunswick, New Jersey, Estados Unidos

1994 - 1998
Senior Lab Technician Full Time

Rutgers University

Piscataway, New Jersey, Chile

1991 - 1993
Instructor Part Time

Universidad de Chile

La Pintana, Santiago, Chile

1990 - 1991
Associate Professor Full Time

Universidad de Chile

Santiago, Chile

2011 - 2015

Post-Doctoral supervision:
• Dra. Karina Ruiz, Project Fondecyt postdoc N°3130624 “How does quinoa deal with salt stress? Evaluation of architectural traits and transcription factors related to stress tolerance genes that make it a successful crop in a challenging environment. October 2012-September 2014 (tutor).
• Dra. Lorena Marchant, Identification of metabolic pathways involved in the aroma of Fragaria chiloensis. April 2007-August 2007.
Doctoral students:
• Charleen Copier (Director), Doctorate in Agricultural and Veterinary Sciences, Universidad de Chile, ongoing (2019), CONICYT Fellow.
• Maria Angelica Ormeño (co-director), Doctorate in Agricultural and Veterinary Sciences, Universidad de Chile, ongoing (2019), CONICYT Fellow.
• Cristian Hernandez (co-director), Doctorate in Food and Nutrition, Universidad de Chile, ongoing (2019), CONICYT Fellow.
• Denisse Zamorano (Director), Doctorate in Agricultural and Veterinary Sciences, Universidad de Chile, ongoing (2017); CONICYT Fellow.
• Daniela Arias (co-director), Doctorate in Biotechnology, Universidad de Chile, finished 06/2019.
• Loreto Prat (Director), Doctorate in Biotechnology, Universidad Andres Bello, finished 12/2014. Current position: Associate Professor, University of Chile.
• Sergio Diez de Medina (Director), Doctorate in Biotechnology, Universidad Andres Bello, finished 05/2014, CONICYT fellow.
• Juan Carlos Rios (Director), Doctorate in Biotechnology, Universidad Andres Bello, finished 05/2014.
• Lorena Marchant (co-director), Doctorate in Biology, Facultad de Ciencias, Universidad de Chile, finished: 2004 (CONICYT and Andes Fundation fellow).
Master students:
• Javiera Fuentes, MSc. in Agricultural Sciences, Universidad de Chile, finished 11/2019.
• Barbara Valenzuela, MSc. in Agricultural Sciences, Universidad de Chile, finished 11/2019.
• Jorge Moraga, MSc. in Agricultural Sciences, Universidad de Chile, finished 12/2016.
Undergraduate students
• Romina Moris, Biochemistry, Universidad de Santiago, Undergraduate Thesis, ongoing (2019)
• Diego Caceres, Agronomist Engineering, Universidad de Chile, Undergraduate Thesis, ongoing (2019).
• Rodrigo Corral, Agronomist Engineering, Universidad de Chile, Undergraduate Thesis, 2020.
• Gaëlle Calvez, Agronomist Engineering, Universidad de Chile, Undergraduate Thesis, 2020.
• Kedy Ho, Biotechnology Engineering, Instituto Tecnológico de Costa Rica (TEC), 2018.
• Natalia Molina, Agronomist Engineering, Universidad de Chile, Undergraduate Thesis, 2017.
• Francisca Matus, Agronomist Engineering, Universidad de Chile, Undergraduate Thesis, 2013.
• María Soledad Cabrera, Molecular Biotechnology Engineering, Faculty of Sciences, Universidad de Chile, Undergraduate Thesis, 2011.
• Gabriel Ballesteros, Bioinformatics Engineering, Universidad de Talca, Undergraduate Thesis, 2010.
• Alejandra Cifuentes, Biochemistry, Faculty of Biological Sciences, Pontificia Universidad Católica, Undergraduate Thesis, 2010.
• Jonathan Maldonado, Molecular Biotechnology Engineering, Faculty of Sciences, Universidad de Chile, Undergraduate Thesis, 2010.
• Margarita Santiago, Molecular Biotechnology Engineering, Faculty of Sciences, Universidad de Chile, Undergraduate Thesis, 2007.
• Juan Saba, Civil Engineering in Computer Sciences, Facultad de Ciencias Físicas y Matemáticas, Universidad de Chile. Undergraduate Thesis, 2006 (co-adviser).
• Francisco Duarte, Biochemistry, Universidad de Santiago. Undergraduate Thesis, 2005.
• Andres Tittarelli, Molecular Biotechnology Engineering, Faculty of Sciences, Universidad de Chile, Undergraduate Thesis, 2005.
• Nicolas Loira, Civil Engineering in Computer Sciences, Facultad de Ciencias Físicas y Matemáticas, Universidad de Chile. Undergraduate Thesis, 2005 (co-adviser).
• Luis Milla, Molecular Biotechnology Engineering, Faculty of Sciences, Universidad de Chile, Undergraduate Thesis, 2003.

TEACHING RESPONSABILITIES
Currently: Biochemistry for agronomist undergraduate students (Universidad de Chile) and Advanced Genetics for Ph.D. students (Agricultural and Veterinary Sciences Program).

2015-2017: Rescue and valorization of the blood-flesh peach by generating a bank of live germplasm and the study of its nutritional and culinary properties in the town of Constitucion, Maule Region.(FIA; PYT-2015-0390). This project allowed the establishment of an association for family farmers to comercialize their products and get new peach plants with higher concentration of antioxidants.

Academic Forum Chile - Japan 2014

CONICYT

Chile, 2014

Member of the chilean delegation to participate in the group Biological Sciences: Genes, cell and organisms. Chilean coordinator: Dr. Miguel Allende; Japanese coordinator: Dr. Hiroyuki Takeda
Fellowship to attend to RGC7 (7th International Rosaceae Genomics Conference). Seattle, WA

RosBreed

Estados Unidos, 2014

7th International Rosaceae Genomics Conference.
Associate Editor

Frontiers in Plant Science

Suiza, 2019

Plant Breeding Section


Nutritional Characterization of Chilean Landraces of Common Bean Marquez, Katherine; Arriagada, Osvin; Perez-Diaz, Ricardo; Cabeza, Ricardo A.; Plaza, Andrea; Arevalo, Barbara; Meisel, Lee A.; Ojeda, Daniela; Silva, Herman; Schwember, Andres R.; Fuentes, Camila; Flores, Monica; Carrasco, Basilio Article ISI PLANTS-BASEL (2024)
Evaluation of a Red Grape Marc Extract as a Natural Nitrification Inhibitor and its Effect on Soil Bacterial Community Ormeno, Maria Angelica; Maldonado, Jonathan Elias; Gonzalez, Mauricio; Silva, Herman; Covarrubias, Jose Ignacio Article ISI JOURNAL OF SOIL SCIENCE AND PLANT NUTRITION (2023)
Light supplementation and growing season affect the quality and antioxidant activity of lettuce Cristian Hernández-Adasme; Herman Silva; Javier Saavedra-Romero; Vicente Martínez; Víctor Escalona Article SCIELO CHILEAN JOURNAL OF AGRICULTURAL RESEARCH (2023)
An Upgraded, Highly Saturated Linkage Map of Japanese Plum (<i>Prunus salicina</i> Lindl.), and Identification of a New Major Locus Controlling the Flavan-3-ol Composition in Fruits Battistoni, Benjamin; Salazar, Juan; Vega, Wladimir; Valderrama-Soto, Diego; Jimenez-Munoz, Pablo; Sepulveda-Gonzalez, Ailynne; Ahumada, Sebastian; Cho, Isaac; Gardana, Claudio Sebastiano; Morales, Hector; Pena-Neira, Alvaro; Silva, Herman; Maldonado, Jonathan; Gonzalez, Mauricio; Infante, Rodrigo; Pacheco, Igor Article ISI FRONTIERS IN PLANT SCIENCE (2022)
Descriptive Genomic Analysis and Sequence Genotyping of the Two Papaya Species (Vasconcellea pubescens and Vasconcellea chilensis) Using GBS Tools Carrasco, Basilio; Arevalo, Barbara; Perez-Diaz, Ricardo; Rodriguez-Alvarez, Yohaily; Gebauer, Marlene; Maldonado, Jonathan E.; Garcia-Gonzales, Rolando; Chong-Perez, Borys; Pico-Mendoza, Jose; Meisel, Lee A.; Ming, Ray; Silva, Herman Article ISI PLANTS-BASEL (2022)
Genetic diversity, polyphenolic composition and fruit quality trait phenotypic analyses of a Chilean heritage blood-flesh peach (Prunus persica L.) Corral, Rodrigo; Carrasco, Basilio; Ramirez, Cesar; Marchant, Lorena; Pena, Alvaro; Covarrubias, Jose Ignacio; Meisel, Lee A.; Pacheco, Igor; Bascunan-Ortiz, Elsa R.; Silva, Herman Article ISI International Journal of Agriculture and Natural Resources (2022)
Potential of traditional Chilean blood-fleshed peach to support livelihood opportunities in local agriculture Marchant, Lorena; Campos, Javiera; Luco, Javiera; Ramirez, Cesar; Barrientos, Freddy; Carrasco, Basilio; Silva, Herman Article ISI FRONTIERS IN SUSTAINABLE FOOD SYSTEMS (2022)
RNA-seq analysis and transcriptome assembly of<i> Salicornia</i><i> neei</i> reveals a powerful system for ammonium detoxification Diaz-Silva, Monica; Maldonado, Jonathan; Veloso, Pamela; Delgado, Nicol; Silva, Herman; Gallardo, Jose A. Article ISI ELECTRONIC JOURNAL OF BIOTECHNOLOGY (2022)
Genome-Wide Analysis of Somatic Embryogenesis-Related Transcription Factors in Cultivated Strawberry (Fragaria x ananassa) and Evolutionary Relationships among Rosaceae Species Garrido-Bigotes, Adrian; Silva, Herman; Hasbun, Rodrigo Article ISI AGRONOMY-BASEL (2021)
Improved physiological performance in grapevine (Vitis vinifera L.) cv. Cabernet Sauvignon facing recurrent drought stress Zamorano, D.; Franck, N.; Pastenes, C.; Wallberg, B.; Garrido, M.; Silva, H. Article ISI AUSTRALIAN JOURNAL OF GRAPE AND WINE RESEARCH (2021)
A de novo transcriptome analysis revealed that photomorphogenic genes are required for carotenoid synthesis in the dark-grown carrot taproot Arias, Daniela; Maldonado, Jonathan; Silva, Herman; Stange, Claudia Article ISI MOLECULAR GENETICS AND GENOMICS (2020)
Biogeography, phylogenetic relationships and morphological analyses of the South American genusMutisiaL.f. (Asteraceae) shows early connections of two disjunct biodiversity hotspots Moreira-Munoz, Andres; Scherson, Rosa A.; Luebert, Federico; Jose Roman, Maria; Monge, Marcelo; Diazgranados, Mauricio; Silva, Herman Article ISI ORGANISMS DIVERSITY EVOLUTION (2020)
Identification of a conserved set of cytokinin-responsive genes expressed in the fruits of Prunus persica Mujica, Karen; Ponce, Claudio; Silva, Herman; Meisel, Lee A. Article ISI PLANT GROWTH REGULATION (2020)
Present and future of marker-assisted breeding in sweet and sour cherry Quero-García, J.; Campoy, J.A.; Barreneche, T.; Le Dantec, L.; Wenden, B.; Fouché, M.; Dirlewanger, E.; Silva, H.; Cai, L.; Iezzoni, A. Article SCOPUS ACTA HORTICULTURAE (2019)
RNA-seq Analysis of Salt-Stressed Versus Non Salt-Stressed Transcriptomes of Chenopodium quinoa Landrace R49 Ruiz, Karina B.; Maldonado, Jonathan; Biondi, Stefania; Silva, Herman Article ISI SCOPUS GENES (2019)
Transcriptome datasets from leaves and fruits of the sweet cherry cultivars Bing Lapins and Rainier Maldonado J.; Dhingra A.; Carrasco B.; Meisel, L.; Silva H. Article SCOPUS Data in Brief (2019)
Construction of a highly saturated linkage map in Japanese plum (Prunus salicina L.) using GBS for SNP marker calling Carrasco,Basilio; Gonzalez, Maximo; Gebauer, Marlene; Garcia-Gonzalez, Rolando; Maldonado, Jonathan; Silva, Herman Article ISI SCOPUS PLOS ONE (2018)
Discovery of mutations in Chenopodium quinoa Willd through EMS mutagenesis and mutation screening using pre-selection phenotypic data and next generation sequencing Mestanza, C.; Riegel, R.; Vásquez, S. C.; Veliz, D.; Cruz-Rosero, N.; Canchignia, F.; Silva, H. Article WOS core collection ISI The Journal of Agricultural Science (2018)
Nitrogen physiology of contrasting genotypes of Chenopodium quinoa Willd. (Amaranthaceae) Bascunan-Godoy, Luisa; Sanhueza, Carolina; Pinto, Katherine; Cifuentes, Leonardo; Reguera, Maria; Briones, Vilbett; Zurita-Silva, Andres; Alvarez, Rodrigo; Morales, Andrea; Silva, Herman Article ISI SCOPUS SCIENTIFIC REPORTS (2018)
Regeneration of highland papaya (Vasconcellea pubescens) from anther culture Chong-Perez, B; Carrasco, B; Silva, H; Herrera, F; Quiroz, K; Garcia-Gonzales, R Article ISI SCOPUS APPLICATIONS IN PLANT SCIENCES (2018)
Characterization of the high-affinity phosphate transporter PHT1;4 gene promoter of Arabidopsis thaliana in transgenic wheat Peñaloza, E.; Santiago, M.; Cabrera, S.; Muñoz, G.; Corcuera, L. J.; Silva, H. Article ISI SCOPUS BIOLOGIA PLANTARUM (2017)
Comparing salt-induced responses at the transcript level in a salares and coastal-lowlands landrace of quinoa (Chenopodium quinoa Willd) Ruiz, Karina B.; Rapparini, Francesca; Bertazza, Gianpaolo; Silva, Herman; Torrigiani, Patrizia; Biondi, Stefania Article ISI SCOPUS ENVIRONMENTAL AND EXPERIMENTAL BOTANY (2017)
Genetic, cytological and molecular characterization of chia (Salvia hispanica L.) provenances Palma-Rojas, Claudio; Gonzalez, Carla; Carrasco, Basilio; Silva, Herman; Silva-Robledo, Herman Article ISI SCOPUS BIOCHEMICAL SYSTEMATICS AND ECOLOGY (2017)
RNA-seq analysis of the head-kidney transcriptome response to handling-stress in the red tusk-eel (Genypterus chilensis) Aballai, Víctor; Aedo, Jorge E.; Maldonado, Jonathan; Bastias-Molina, Macarena; Silva, Herman; Meneses, Claudio; Boltaña, Sebastian; Reyes, Ariel; Molina, Alfredo; Valdés, Juan Antonio Article ISI SCOPUS COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS PROTEOMICS (2017)
Transcriptional Responses of Chilean Quinoa (Chenopodium quinoa Willd.) Under Water Deficit Conditions Uncovers ABA-Independent Expression Patterns Morales, Andrea; Zurita-Silva, Andres; Maldonado, Jonathan; Silva, Herman Article ISI SCOPUS FRONTIERS IN PLANT SCIENCE (2017)
Transcriptomic analysis of the hepatic response to stress in the red cusk-eel (Genypterus chilensis): Insights into lipid metabolism, oxidative stress and liver steatosis Naour, Sebastian; Espinoza, Brisa M.; Aedo, Jorge E.; Zuloaga, Rodrigo; Maldonado, Jonathan; Bastias-Molina, Macarena; Silva, Herman; Meneses, Claudio; Gallardo-Escárate, Cristian; Molina, Alfredo; Valdés, Juan Antonio; Chen, Tzong-Yueh Article ISI SCOPUS PLOS ONE (2017)
De novo transcriptome assembly of 'Angeleno' and 'Lamoon' Japanese plum cultivars (Prunus salicina) Gonzalez, M.; Maldonado J.; Salazar, E; Silva H.; Carrasco B. Article SCOPUS Genomics Data (2016)
Genetic structure based on EST-SSR: a putative tool for fruit color selection in Japanese plum (Prunus salicina L.) breeding programs González, M.; Salazar, E.; Castillo, J.; Morales, P.; Mura-Jornet, I.; Maldonado, J.; Silva, H.; Carrasco, B. Article ISI SCOPUS MOLECULAR BREEDING (2016)
Salares versus coastal ecotypes of quinoa: Salinity responses in Chilean landraces from contrasting habitats Ruiz, K.B.,; Aloisi I; Del Duca S; Canelo, V; Torrigiani P.; Silva H.; Biondi, S. Article ISI SCOPUS PLANT PHYSIOLOGY AND BIOCHEMISTRY (2016)
Association between the concentration of n-alkanes and tolerance to cracking in commercial varieties of sweet cherry fruits Rios JC,; Robledo, F; Schreiber L.; Zeisler, V; Lang, E.; Carrasco B.; Silva H. Article ISI SCOPUS SCIENTIA HORTICULTURAE (2015)
Characterization of the acetohydroxyacid synthase multigene family in the tetraploide plant Chenopodium quinoa Mestanza, C.; Riegel R.; Silva H.; Vasquez, SC Article ISI SCOPUS ELECTRONIC JOURNAL OF BIOTECHNOLOGY (2015)
mRNA-seq reveals skeletal muscle atrophy in response to handling stress in a marine teleost, the red cusk-eel (Genypterus chilensis) Aedo, JE; Maldonado J.; Aballai V.; Estrada, JM; Bastias-Molina, M; Meneses, C.; Gallardo-Escarate, C; Silva H.; Molina A.; Valdes, JA Article ISI BMC GENOMICS (2015)
Genetic and morphological characterization of the endangered Austral papaya Vasconcellea chilensis (Planch. ex A. DC.) Solms Carrasco B.; Díaz, C.; Garcia-Gonzales, R; Avila P.; Lobos, G.A.; Silva H. Article ISI SCOPUS GENETIC RESOURCES AND CROP EVOLUTION (2014)
Identification of volatile compounds associated with the aroma of white strawberries (Fragaria chiloensis) Prat, L; Espinoza, MI; Agosin, E; Silva H. Article ISI JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE (2014)
Sequencing and de novo assembly of the red cusk-eel (Genypterus chilensis) transcriptome Aedo J.E.; Maldonado J.; Estrada J.M.; Fuentes E.N.; Silva H.; Gallardo-Escarate, C; Molina A.; Valdes J.A. Article ISI SCOPUS MARINE GENOMICS (2014)
Characterization of cytokinin signaling and homeostasis gene families in two hardwood tree species: Populus trichocarpa and Prunus persica Immanen, J; Nieminen, K; Silva, HD; Rojas, FR; Meisel LA; Silva H.; ALBERT, VA; Hvidsten, TR; Helariutta, Y. Article ISI SCOPUS BMC Genomics (2013)
Comparative genomics analysis in Prunoideae to identify biologically relevant polymorphisms Koepke, T; Schaeffer, S; Harper, A; Dicenta, F; Edwards M.; Henry, RJ; Moller, BL; Meisel, L.; Oraguzie, N; Silva H.; Sanchez-Perez, R; Dhingra A. Article ISI SCOPUS Plant Biotechnology Journal (2013)
Construction and Comparative Analyses of Highly Dense Linkage Maps of Two Sweet Cherry Intra-Specific Progenies of Commercial Cultivars Klagges, C.; Campoy, JA; Quero-Garcia, J; Guzman, A.; Mansur, L.; Gratacos, E.; Silva H.; Rosyara, UR; Iezzoni, A.; Meisel LA; Dirlewanger, E. Article ISI SCOPUS PLOS ONE (2013)
Profiling carbohydrate composition, biohydrogen capacity, and disease resistance in potato Diez-de-Medina Roldán, Sergio; Silva, Herman; Jeblick, Wolfgang; Nowik, Isabella; Modigell, Michael; Neuhaus, H. Ekkehard; Conrath, Uwe Article ISI SCOPUS ELECTRONIC JOURNAL OF BIOTECHNOLOGY (2013)
The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution Verde I.; Abbott AG; Scalabrin S; Jung S.; Shu, SQ; Marroni F; Zhebentyayeva T.; Dettori MT; Grimwood J; Cattonaro F.; Zuccolo A; Rossini, L.; Jenkins, J.; Vendramin, E; Meisel LA; Decroocq V.; Sosinski B; Prochnik S; Mitros T; Policriti, A.; Cipriani G.; Dondini, L; Ficklin S; Goodstein DM; Xuan, PF; Del Fabbro C; Aramini V.; Copetti D; Gonzalez S.; Horner DS; Falchi R; Lucas, S.; Mica E; Maldonado J.; Lazzari B; Bielenberg D; Pirona R; Miculan M; Barakat, A; Testolin R.; Stella A.; Tartarini S; Tonutti P; Arús P.; Orellana, A; Wells C; Main D; Vizzotto G; Silva H.; Salamini F; Schmutz J; Morgante M; Rokhsar DS. Article ISI SCOPUS Nature Genetics (2013)
A molecular marker approach using intron flanking EST-PCR to map candidate genes in peach (Prunus persica) Diez de Medina S.; Silva H. Article ISI SCIELO SCOPUS ELECTRONIC JOURNAL OF BIOTECHNOLOGY (2012)
The genome of woodland strawberry (Fragaria vesca) Shulaev V.; Mittler, R; Sargent D.J.; Girona E.L.; Crowhurst R.N.; Hellens R.P.; Allan A.C.; Mockler T.C.; Jaiswal, P; Liston A.; Filichkin S.A.; Dharmawardhana P.; Elser J.; Raja R.; Priest H.D.; Bryant D.W.; Fox S.E.; Givan S.A.; Wilhelm L.J.; Folkerts O.; Crasta O.R.; Delcher A.L.; Salzberg S.L.; Mockaitis K.; CARTER J.; Mane S.P.; Evans C.; Setubal J.C.; Williams K.P.; Dickerman A.W.; Burns P.; Borodovsky M.; Davis, T. M.; Liu, B; Slovin J.P.; Bassil N.; Harkins T.; Kodira C.; Desany B.; Jensen R.V.; Michael T.P.; Zdepski A.; Wang, W.; Kerstetter R.A.; Celton J.-M.; Rees D.J.G.; Holt S.H.; Rojas J.J.R.; Veilleux R.E.; Flinn B.; Chatterjee, M.; Salama D.Y.; Folta K.M.; Silva H.; Meisel, L.; Aharoni, A; Adato A.; Troggio M.; Viola R.; Velasco, R; Ashman T.-L.; Wang, H.; Bennetzen, J. L.; Naithani S.; Christoffels A.; Schwab W.; Korban S.S.; Davik J.; Monfort, A; Arús P.; Denoyes-Rothan B. Article ISI SCOPUS NATURE GENETICS (2011)
Comparative EST transcript profiling of peach fruits under different post-harvest conditions reveals candidate genes associated with peach fruit quality Vizoso P.; Meisel LA; Tittarelli, A; Latorre, M; Saba J.; Caroca R.; Maldonado J.; Cambiazo, V; Campos-Vargas, R; Gonzalez, M.; Orellana, A; Silva H. Article ISI SCOPUS BMC GENOMICS (2009)
Isolation and functional characterization of cold-regulated promoters, by digitally identifying peach fruit cold-induced genes from a large EST dataset Tittarelli, A; Santiago M.; Morales A.; Meisel LA; Silva H. Article ISI SCOPUS BMC PLANT BIOLOGY (2009)
Identification of woolliness response genes in peach fruit after post-harvest treatments Gonzalez-Aguero, M; Pavez, L.; Ibáñez F.; Pacheco, I; Gonzalez, M.; Cambiazo, V; Campos-Vargas, R; Meisel, L. A.; Orellana, A; Silva H.; Retamales J. Article SCOPUS JOURNAL OF EXPERIMENTAL BOTANY (2008)
Isolation and comparative analysis of the wheat TaPT2 promoter: identification in silico of new putative regulatory motifs conserved between monocots and dicots Tittarelli, A; Milla, L; Vargas F.; Morales A.; Neupert, C; Meisel LA; Salvo-G, H; Peñaloza E.; Muñoz G.; CORCUERA, LJ; Silva H. Article ISI SCOPUS JOURNAL OF EXPERIMENTAL BOTANY (2007)
Arabidopsis thaliana: A model host plant to study plant-pathogen interaction using Chilean field isolates of Botrytis cinerea Gonzalez, J; Reyes, F.; Salas C.; Santiago M.; Codriansky, Y; Coliheuque, N; Silva H. Article ISI SCIELO SCOPUS BIOLOGICAL RESEARCH (2006)
AtUTr1, a UDP-glucose/UDP-galactose transporter from Arabidopsis thaliana, is located in the endoplasmic reticulum and up-regulated by the unfolded protein response Reyes, F.; Marchant, L; Norambuena, L; Nilo R.; Silva H.; Orellana, A Article ISI SCOPUS JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
Seasonal variation in the development of chilling injury in 'O'Henry' peaches Campos-Vargas, R; Becerra, O; Baeza-Yates, R; Cambiazo, V; Gonzalez, M.; Meisel, L.; Orellana, A; Retamales J.; Silva H.; Defilippi, BG Article ISI SCOPUS SCIENTIA HORTICULTURAE (2006)
The Ca2+ pump inhibitor, thapsigargin, inhibits root gravitropism in Arabidopsis thaliana Urbina, DC; Silva H.; Meisel LA Article ISI SCIELO SCOPUS BIOLOGICAL RESEARCH (2006)
A Rapid and Efficient Method for Purifying High Quality Total RNA from Peaches (Prunus persica) for Functional Genomics Analyses Meisel, L.; Fonseca B.; Gonzalez S.; Baeza-Yates, R; Cambiazo, V; Campos, R.; Gonzalez, M.; Orellana, A; Retamales J.; Silva H. Article ISI SCIELO SCOPUS BIOLOGICAL RESEARCH (2005)
Phosphate deficiency regulates phosphoenolpyruvate carboxylase expression in proteoid root clusters of white lupin Peñaloza E.; Muñoz G.; Salvo-Garrido, H; Silva H.; CORCUERA, LJ Article ISI SCOPUS JOURNAL OF EXPERIMENTAL BOTANY (2005)
Transport of UDP-galactose in plants - Identification and functional characterization of AtUTr1, an Arabidopsis thaliana UDP-galactose/UDP-glucose transporter Norambuena, L; Marchant, L; Berninsone, P; Hirschberg, CB; Silva H.; Orellana, A Article ISI SCOPUS JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
Nitric oxide and salicylic acid signaling in plant defense Klessig, D.F.; Durner J.; Noad R.; Navarre D.A.; Wendehenne D.; Kumar D.; Zhou J.M.; Shah, J; Zhang, S; Kachroo P.; Trifa Y.; Silva H.; Pontier D.; Lam, E. Article SCOPUS PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)
NPR1 differentially interacts with members of the TGA/OBF family of transcription factors that bind an element of the PR-1 gene required for induction by salicylic acid Zhou J.-Ma.; Trifa Y.; Silva H.; Shah, J; Klessig, D.F.; Pontier D.; Lam, E. Article SCOPUS MOLECULAR PLANT-MICROBE INTERACTIONS (2000)
Characterization of a new Arabidopsis mutant exhibiting enhanced disease resistance Silva, H; Yoshioka, K; Dooner, HK; Klessig, DF Article ISI MOLECULAR PLANT-MICROBE INTERACTIONS (1999)
Engineering disease and pest resistance in plants Dempsey, DA; Silva, H; Klessig, DF Article ISI TRENDS IN MICROBIOLOGY (1998)
Protein dephosphorylation mediates salicylic acid-induced expression of PR-1 genes in tobacco Conrath, U; Silva, H; Klessig, DF Article ISI PLANT JOURNAL (1997)
INDUCTION, MODIFICATION, AND TRANSDUCTION OF THE SALICYLIC-ACID SIGNAL IN PLANT DEFENSE RESPONSES CHEN, ZX; MALAMY, J; HENNING, J; CONRATH, U; SANCHEZCASAS, P; SILVA, H; RICIGLIANO, J; KLESSIG, DF Article ISI PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (1995)
ACTIVE OXYGEN SPECIES IN THE INDUCTION OF PLANT SYSTEMIC ACQUIRED-RESISTANCE BY SALICYLIC-ACID CHEN, ZX; SILVA, H; KLESSIG, DF Article ISI SCIENCE (1993)
Aislamiento, selección y caracterización de hongos ligninolíticos chilenos (Isolation, Selection and Characterization of chilean ligninolytic fungi) Silva H.; Landa, A; Agosin, E Article ARCHIVOS DE BIOLOGIA Y MEDICINA EXPERIMENTALES (1990)
Characterization of Palo Podrido, a Natural Process of Delignification in Wood Agosin, E; Blanchette R.; Silva H.; Lapierre, C.; Cease, C; Ibach, R.; Abad, A.; Muga, P Article APPLIED AND ENVIRONMENTAL MICROBIOLOGY (1990)
A MECHANISM OF ACTION OF SALICYLIC-ACID IN PLANT-DISEASE RESISTANCE Klessig, D.; Chen, Z.H.; Conrath, U.; Sanchez-Casas, P.; Ricigliano, J.; Silva, H. Article JOURNAL OF CELLULAR BIOCHEMISTRY


AtUTr1 a UDP-galactose/UDP-glucose transporter from Arabidopsis thaliana is located at the endoplasmic reticulum and is involved in protein folding quality control Orellana, A; Reyes, F.; Marchant, L; Norambuena, L; Nilo R.; Silva H. Abstract ISI FASEB JOURNAL (2006)


Functional Genomics: Transcriptomics Trainotti, Livio, Silva, Herman; Kole, Chittaranjan; Abbot, Albert BookSection (2012)
Innovación, Desarrollo y Negocios en Biotecnología Herrera, Raul; Silva, Herman; Barrera A.; Venegas, V; Tomic, T; Rojas, H BookSection (2005)


Functional Genomics as a Tool to Unveil Bioactive Compounds Accumulation in Commercial and Native Plants from Chile Silva, H.; Maldonado, J.; Meisel, L. A.; Pacheco, I.; Carrasco, B. ConferencePaper (2019)
Bioinformatics and molecular analysis of factors involved in fruit development and cracking tolerance in different varieties of sweet cherry. Silva, Herman ConferencePaper (2017)
Functional Genomics as a Tool to Unveils Bioactives Compounds in Commercial and Native Plants. Silva, Herman ConferencePaper (2017)
Functional genomics as a tool to understand cracking tolerance in sweet cherry (Prunus avium). Silva, Herman ConferencePaper (2016)
Transcriptional, genetic and chemical approaches to understand tolerance to cracking in sweet cherry fruits. Silva, Herman ConferencePaper (2016)
A functional genomics approach to understand cracking in sweet cherries. Silva, Herman ConferencePaper (2014)
Functional genomics as a tool for improving fruit quality. Silva, Herman ConferencePaper (2014)
Identification of SSRs with Polymorphisms between Different Prunus avium Cultivars Klagges, C.; Delgado, N; Meisel, L.; Gratacos, E.; Mansur, L.; Silva H. ConferencePaper ISI XXXI INTERNATIONAL HORTICULTURAL CONGRESS, IHC2022: INTERNATIONAL SYMPOSIUM ON INNOVATIVE PERENNIAL CROPS MANAGEMENT (2014)
Potencial genético de plantas cultivadas en Chile (Genetic potential of cultivated plants in Chile). Silva, Herman ConferencePaper (2014)
A Functional Genomics Approach to Understand Cracking Tolerance in Sweet Cherry (Prunus avium). Silva, Herman ConferencePaper (2013)
A molecular marker approach using intron flanking EST-PCR to map candidate genes in peach (Prunus persica). Silva, Herman ConferencePaper (2013)
Functional genomics as a tool for molecular marker assisted breeding. Silva, Herman ConferencePaper (2013)
A Functional Genomics approach to understand cracking susceptibility in sweet cherries (Prunus avium). Silva, Herman ConferencePaper (2012)


Construction of a highly saturated linkage map in Japanese plum (Prunus salicina L.) Carrasco, B.; Gonzalez, M.; Maldonado, J.; Silva, H. ConferencePoster (2019)
Genomics of Fruit Quality, Nutritional Composition and Phytochemical Content of Cherries and Plums Quero-Garcia, J.; Pacheco-Cruz, I.; Iezzoni, A.; Serradilla, M.; Le Dantec, L.; Fouché, M.; Barreneche, T.; Silva, H.; Wenden, B.; Dirlewanger, E. ConferencePoster (2019)
Potentials of unexplored plant genetic resources from Ecuador: Vasconcellea sp. and Annona sp. Picó-Mendoza, J.; Pinoargote, M.; Madrid, L.; Garcia, R.; Chong, B.; Silva, H.; Carrasco, B. ConferencePoster (2018)
Biotechnological Tools Applied to Vasconcellea spp: Haploids generation and Genetic Variability Using Genotyping by Sequencing (GBS). Garcia, Rolando; Silva, Herman; Carrasco, Basilio ConferencePoster (2017)
Effect of gibberellic acid on cracking, maturity and fruit quality of sweet cherry trees. Sagredo, Karen; Aburto, Juan; Moraga, Jorge; Araya, Rocio; Cares, Juan; Silva, Herman ConferencePoster (2017)
Functional characterization of the transcriptional co-factor Par1 by over-expression in carrot. Arias, Daniela; Maldonado, Jonathan; Silva, Herman; Stange, Claudia ConferencePoster (2017)
Present and future of marker-assisted breeding in sweet and sour cherry. Quero-Garcia, Jose; Campoy, Jose Antonio; Barreneche, Teresa; Le Dantec, Loïck; Wenden, Bénédicte; Fouché, Mathieu; Dirlewanger, Elisabeth; Silva, Herman; Cai, Lichun; Iezzony, Amy ConferencePoster (2017)
The Sweet Cherry Genome: A New Sequencing Project. Fouché, Mathieu; Le Dantec, Loïck; Wenden, Bénédicte; Quero-Garcia, Jose; Barreneche, Teresa; Gasic, Ksenija; Barac, Goran; Saski, Christopher; Iezzony, Amy; Fernandez, Felicidad; Silva, Herman; Dirlewanger, Elisabeth ConferencePoster (2017)
Transcriptome Characterization of V. pubescens and V. chilensis: Two Phenotipically Contrasting Papaya Species. Gonzalez, Evelin; Maldonado, Jonathan; Leon, Rocio; Garcia, Rolando; Carrasco, Basilio; Silva, Herman ConferencePoster (2017)
Transcriptomic Analysis of ‘Garnem’ Rootstock By RNA-SEQ Reveals Genes and GENE Ontologies Involved in Drought Response. Bielsa, B.; Hewitt, S.; Maldonado, Jonathan; Reyes Chin-Wo, S.; Fernandez i Marti, Angel; Silva, Herman; Dhingra, Amit; Rubio-Cabetas, M.J. ConferencePoster (2017)
Bioinformatics and Molecular Analysis of Factors Involved in Developmental and Cracking Tolerance in Different Varieties of Sweet Cherry. Maldonado, Jonathan; Poblete, Giselle; Leon, Rocio; Carrasco, Basilio; Silva, Herman ConferencePoster (2016)
Functional Genomics and Molecular Studies of Genes Involved in the Synthesis and Accumulation of Carotenoids in Daucus carota under dark/light conditions. Arias, Daniela; Maldonado, Jonathan; Silva, Herman; Stange, Claudia ConferencePoster (2016)
Genetic structure based on EST-SSR: A promising tool for fruit color selection in Japanese plum (Prunus salicina L.) breeding programs. Gonzalez, Maximo; Salazar, Erika; Castillo, Javiera; Morales, Paloma; Mura, Isidora; Maldonado, Jonathan; Silva, Herman; Carrasco, Basilio ConferencePoster (2016)
Correlation Between Alkanes and Cracking in Different Sweet Cherries Varieties-Sweet Cherry. Poblete, Gisselle; Robledo, Francisco; Maldonado, Jonathan; Schreiber, Lukas; Zeisler, Viktoria; Carrasco, Basilio; Dhingra, Amit; Silva, Herman ConferencePoster (2015)
De novo transcriptome analysis of Daucus carota modified root under dark or light grown conditions. Arias, Daniela; Maldonado, Jonathan; Silva, Herman; Stange, Claudia ConferencePoster (2015)
Development of a saturated linkage map in Prunus salicina L. using genotyping by sequencing (GBS). Carrasco, Basilio; Gebauer, Marlene; Klagges, Carolina; Silva, Herman ConferencePoster (2015)
Effect of gibberelic acid on cracking and gene expression in sweet cherry fruits. Moraga, Jorge; Sagredo, Karen; Poblete, Gisselle; Silva, Herman ConferencePoster (2015)
Genetic straucture based on EST-SSR: A promising tool for fruit color selection in Japanese plum (Prunus salicilina L.) breeding programs. Gonzalez, Maximo; Castillo, Javiera; Silva, Herman; Carrasco, Basilio; Salazar, Erika ConferencePoster (2015)
Genomic studies on a highly complex trait in sweet cherry: tolerance to rain-induced fruit cracking. Quero-Garcia, Jose; Campoy, Jose Antonio; Lalanne-Tisné, Guillaume; Joly, Jacques; Gibon, Yves; Lahaye, Marc; Le Gall, Sophie; Robledo, Francisco; Silva, Herman; Dirlewanger, Elisabeth ConferencePoster (2015)
High-density SNP-based genetic map of Japanese plum (Prunus salicina L.). Carrasco, Basilio; Gebauer, Marlene; Klafgges, Carolina; Garcia, Rolando; Silva, Herman ConferencePoster (2015)
Molecular phylogeny of Mutisia (Asteraceae, Mutisieae) with biogeographic implications in the Neotropical disjunction. Scherson, Rosa; Moreira-Muñoz, A.; Monge, M.; Silva, Herman ConferencePoster (2015)
PaKCS6 expression and wax accumulation in different sweet cherry cultivars affect tolerance to cracking. Poblete, Gisselle; Silva, Herman ConferencePoster (2015)
RNA seq as a tool to study the effect of handling stress in the expression of genes associated with the immune response of red cusk-eel (Genypterus chilensis). Aballai, Victor; Aedo, Jorge; Maldonado, Jonathan; Silva, Herman; Reyes, Ariel; Valdés, Juan Antonio ConferencePoster (2015)
The Peach v2.0 Release: An Improved Genome Sequence for Bridging the Gap Between Genomics and Breeding in Prunus. Ignazio Verde; Shengqiang Shu; Jerry Jenkins; Simone Scalabrin; Christopher Dardick; Ariel Orellana; Silva, Herman; Laura Rossini; Maria Teresa Dettori; Raul Pirona; Elisa Vendramin; Luca Dondini; Sabrina Micali; Tatyana Zhebentyayeva; Andrea Zuccolo; Stefano Tartarini; Meisel, Lee; Albert G. Abbott; Michele Morgante; Daniel S. Rokhsar; Jeremy Schmutz ConferencePoster (2015)
Composición aromática de Fragaria chiloensis (L.) Mill y Fragaria x ananassa Duch. Prat, Loreto; Espinoza, Maria Ines; Agosin, Eduardo; Silva, Herman ConferencePoster (2014)
Correlation between the amount of alkanes and cracking in different sweet cherries varieties. Rios, Juan Carlos; Robledo, Francisco; Poblete, Gisselle; Silva, Herman ConferencePoster (2014)
Cultivares chilenos de quinua: Aspectos que contribuyen a una excepcional tolerancia a condiciones de alta salinidad. Ruiz, Karina; Silva, Herman ConferencePoster (2014)
Factores moleculares implicados en la partidura del fruto en cerezo. Balbontin, Cristian; Ayala, H.; Rubilar, J.; Henriques, J. A.; Maldonado, Jonathan; Silva, Herman ConferencePoster (2014)
Genetic and morphological analysis of the endangered austral papaya (Vasconcellea chilensis (Planch. ex A. DC.) Solms). Carrasco, Basilio; Gebauer, Marlene; Garcia, Rolando; Silva, Herman ConferencePoster (2014)
Genetic characterization of Japanese plum (Prunus salicina L.) cultivars and segregant populations through Genotyping-By-Sequencing (GBS) and Simple Sequence Repeat (SSR) technologies. Carrasco, Basilio; Morales, Paloma; Gebauer, Marlene; Silva, Herman ConferencePoster (2014)
Respuestas al estrés salino en cultivares chilenos de quinua: caracterización “In Vitro”. Ruiz, Karina; Canelo, Valentina; Molina, Natalia; Silva, Herman ConferencePoster (2014)
SNPs, SSR, ISSR and phenotypic evaluation of Japanese plum (Prunus salicina L.) cultivars. Carrasco, Basilio; Gebauer, Marlene; Garcia, Rolando; Silva, Herman ConferencePoster (2014)
Analysis of differentially expressed genes from cherry fruit (Prunus avium) among cultivars with contrasting levels of cracking tolerance. Balbontin, Cristian; Ayala, H.; Rubilar, J.; Silva, Herman; Maldonado, Jonathan ConferencePoster (2013)
Approaches Enabling Molecular Breeding of Sweet Cherry. Tyson Koepke; Scott Schaeffer; Christopher Hendrickson; Derick Jiwan; Artemus Harper; Maldonado, Jonathan; Meisel, Lee; Silva, Herman; Nnadozie Oraguzie; Matthew Whiting; Dhingra, Amit ConferencePoster (2013)
Construction of a highly dense map of sweet cherry and its comparative analyses with others Prunus linkage maps. Klagges, Carolina; Guzman, Alejandra; Mansur, Levi; Gratacos, Eduardo; Silva, Herman; Meisel, Lee ConferencePoster (2013)
Desarrollo de nuevas variedades de cerezas en Chile: El Programa de Mejoramiento Genético Asistido de Cerezas en la Pontificia Universidad Católica de Valparaíso. Gratacos, Eduardo; Mansur, Levi; Silva, Herman; Meisel, Lee ConferencePoster (2013)
Development of EST SSR based on the first transcriptome of Prunus salicina. Gonzalez, Maximo; Salazar, Erika; Morales, Paloma; Mura, Isidora; Maldonado, Jonathan; Silva, Herman; Carrasco, Basilio ConferencePoster (2013)
Genetic diversity and paternity test in Japanese plum (Prunus salicina LINDL). Meneses, Marco; Morales, Paloma; Gonzalez, Maximo; Silva, Herman; Gebauer, Marlene; Carrasco, Basilio ConferencePoster (2013)
Genotypic and phenotypic evaluation of Japanese plum (Prunus salicina L.) cultivars. Carrasco, Basilio; Morales, Paloma; Gonzalez, Maximo; Diaz, C.; Meneses, Marco; Gebauer, Marlene; Garcia, Rolando; Silva, Herman ConferencePoster (2013)
Respuestas al estres salino en genotipos de quinoa originarios de Chile: desde su arquitectura hasta sus genes. Ruiz, Karina; Biondi, S.; Molina-Montenegro, M.; Zurita-Silva, Andres; Silva, Herman ConferencePoster (2013)
Root Architecture and gene expression in response to salt stress in Chilean quinoa genotypes. Ruiz, Karina; Silva, Herman ConferencePoster (2013)
The cytokinin response pathway during Prunus persica fruit development. Avendaño, Camilo; Rodriguez, Fernanda; Barindell, Elena; Mujica, Karen; Duchens, Hector; Contador, Loreto; Infante, Rodrigo; Silva, Herman ConferencePoster (2013)
Transcriptional profile of sweet cherry fruits with different tolerance to cracking. Balbontin, Cristian; Ayala, H.; Rubilar, J.; Gainza, Felipe; Stappung, Yazmina; Maldonado, Jonathan; Silva, Herman ConferencePoster (2013)
Chemical characterization of Fragaria chiloensis aroma: Gas chromatography-olfactometry and sensory reconstitution study. Prat, Loreto; Espinoza, Maria Ines; Agosin, Eduardo; Silva, Herman ConferencePoster (2012)
Comparative genomic analysis in Prunoideae. Dhingra, Amit; Tyson Koepke; Scott Schaeffer; Artemus Harper; Nnadozie Oraguzie; Matthew Whiting; Silva, Herman; Meisel, Lee; Sanchez, Raquel; Robert J. Henry; David Edwards ConferencePoster (2012)
Construction and comparative analyses of highly dense linkage maps of two sweet cherry intra-specific progenies of commercial cultivars. Klagges, Carolina; Campoy, Jose Antonio; Quero-Garcia, Jose; Guzman, Alejandra; Mansur, Levi; Gratacos, Eduardo; Silva, Herman ConferencePoster (2012)
Correlation between cracking, CER6 gene expression and alkane concentration in sweet cherry fruits. Rios, Juan Carlos; Lang, Erika; Silva, Herman ConferencePoster (2012)
Isolation of genes differentially expressed during refrigerated storage involved in internal breakdown of Japanese plum (Prunus salicina Lindl.) fruits. Moya, Mario; Defilippi, Bruno; Gonzalez, Maximo; Gebauer, Marlene; Silva, Herman; Carrasco, Basilio ConferencePoster (2012)
RNA seq as a tool to unveil the transcriptome of different sweet cherry varieties. Duchens, Hector; Maldonado, Jonathan; Rios, Juan Carlos; Silva, Herman ConferencePoster (2012)
RNA-seq expression analyses in sweet cherries to try to understand cracking tolerance. Maldonado, Jonathan; Rios, Juan Carlos; Silva, Herman ConferencePoster (2012)
RNA-seq expression analyses in sweet cherries with differential susceptibility to cracking. Silva, Herman; Maldonado, Jonathan; Rios, Juan Carlos ConferencePoster (2012)


Disentangling the epigenetic influence on fruit development and ripening in three stone fruits (Prunus species) Silva, Herman; Hasbun, R; DONOSO, JOSE Proyecto (2020)
ACCLIMATION AND/OR "STRESS MEMORY" IN FRUIT TREES? DISENTANGLING INTERACTIONS BETWEEN ANATOMY, METABOLICS, ECOPHYSIOLOGY, AND TRANSCRIPTOME IN THE RESPONSE TO RECURRENT DROUGHT STRESS IN SPECIES WITH CONTRASTING DROUGHT TOLERANCE. FONDECYT (1161800) Proyecto 2016-2020 Coinvestigador(a)
CHARACTERIZATION OF FRUIT DEVELOPMENT AND IDENTIFICATION OF POTENTIAL BIOACTIVES COMPOUNDS IN PLUMS, PEACH AND SWEET CHERRY THROUGH CONVENTIONAL BREEDING AND MOLECULAR TECHNIQUES FONDECYT (1160600) Proyecto 2016-2020 Inv. Responsable
Rescate y valorización del durazno betarraga mediante la generación de un banco de germoplasma vivo y el estudio de sus propiedades nutricionales y culinarias en la comuna de Constitución, Región del Maule Silva, Herman; Marchant, Lorena Proyecto (2015)
TRANSCRIPTOMIC AND GENOMIC ANALYSIS OF VASCONCELLEA CHILENSIS AND V. PUBESCENS=> AN EVOLUTIONARY AND COMPARATIVE APPROACH USING TWO PHENOTYPICALLY CONTRASTING PAPAYA SPECIES. FONDECYT (1150919) Proyecto 2015-2019 Coinvestigador(a)
IDENTIFICACIÃ“N Y CARACTERIZACIÃ“N DE COMPUESTOS BIOACTIVOS EN PRUNUS AVIUM=> BASES GENÃ‰TICAS Y MOLECULARES PARA ENTENDER LOS MECANISMOS DE SÃ�NTESIS DE ESTOS COMPUESTOS Y SU VARIABILIDAD EN DIFERENTES CULTIVARES DE CEREZO. FONDECYT (3150027) Proyecto 2014-2017 Inv. Patrocinante
International collaborator: “RosBREED: Combining disease resistance with horticultural quality in new rosaceous cultivars” is provided by the Specialty Crop Research Initiative Iezzony, Amy; Silva, Herman Proyecto (2014)
“RosBREED=> Combining disease resistance with horticultural quality in new rosaceous cultivars” USDA’s National Institute of Food and Agriculture (2014-51181-22378) Proyecto 2014-2019 Investigador(a)
FUNCTIONAL GENOMICS APPROACH TO UNDERSTAND CRACKING SUSCEPTIBILITY IN SWEET CHERRY=> AN INTEGRATIVE VIEW FOR PRUNUS SPECIES FONDECYT (1120261) Proyecto 2012-2016 Inv. Responsable
HOW DOES QUINOA DEAL WITH SALT STRESS? EVALUATION OF ARCHITECTURAL TRAITS AND TRANSCRIPTION FACTORS RELATED TO STRESS TOLERANCE GENES THAT MAKE IT A SUCCESSFUL CROP IN A CHALLENGING ENVIRONMENT. FONDECYT (3130624) Proyecto 2012-2014 Inv. Patrocinante
“Creación de una unidad de microscopia avanzada en el Campus Sur” FONDEQUIP (EQM120153) Proyecto 2012-2013 Coinvestigador(a)
Colaborador Internacional. RosBREED=> Enabling marker-assisted breeding in Rosaceae. USDA, USA Proyecto 2009-2013 Investigador(a)
Análisis de cultivos de papas sudamericanas en relación a su potencial uso en la producción de bio-hidrógeno y resistencia a patógenos PCI (062-2008) Proyecto 2009-2011 Inv. Principal
FIELD STUDIES TO DETERMINE THE EFFECTS THAT ENVIRONMENTAL FACTORS MAY HAVE ON THE PHENOTYPE OF TRANSGENIC WHEAT PLANTS DESIGNED TO IMPROVE INORGANIC PHOSPHATE ACQUISITION FROM ACID SOILS. FONDECYT (1090571) Proyecto 2009-2012 Coinvestigador(a)
Proyecto redes “Análisis Genómico Funcional Comparativo entre Arabidopsis y Rosaceas, para identificar genes conservados que están involucrados en polaridad celular” PBCT (PBCT R-11) Proyecto 2008-2009 Coinvestigador(a)
Proyecto redes ”Genómica evolutiva de la interacción planta-insecto=> mecanismos moleculares en el modelo duraznero-áfido” PBCT (PBCT R-1) Proyecto 2008-2009 Coinvestigador(a)
Genética funcional de la producción de biomasa en árboles PCI (CCF-01) Proyecto 2008-2011 Coinvestigador(a)
Potenciando la competitividad de la Industria de la Cereza de exportación. Sinergia entre agronomía y genética molecular para establecer un programa de mejoramiento genético asistido. Innova CORFO (07CN13 PBT-167) Proyecto 2008-2012 Coinvestigador(a)
The Millennium Nucleus in Plant Cell Biology & Biotechnology (PCB). Iniciativa Científica Milenio, Director alterno. ICM (PCB) Proyecto 2008-2011 Investigador(a)
Consorcio Bicentenario Ciencia-Empresa: Innovación Biotecnológica en la Producción de nuevas variedades de vides y frutales de carozo Orellana, Ariel; Silva, Herman Proyecto (2007)
Study of plant cell polarity, The Millennium Nucleus in Plant Cell Biology (PCB) Orellana, Ariel; Silva, Herman; Meisel, Lee Proyecto (2004)
Study of the plant cytoskeleton during bacterial pathogen resistance-response Silva, Herman Proyecto (2003)
Genómica Funcional en Nectarines=> Plataforma para potenciar la competitividad de Chile en exportación de frutas. Director alterno. Programa Genoma en Recursos Naturales Renovables (G02P1001) Proyecto 2002-2005 Investigador(a)
Integración de genes de lupino en el genoma del trigo, con potencial para movilizar el fosforo inorgánico retenido en los suelos del centro-sur y sur de Chile. Fundación para la Innovación Fundación para la Innovación Agraria (FIA BIOT-01-A-36) Proyecto 2002-2005 Coinvestigador(a)
Genómica Funcional en Nectarines: Plataforma para potenciar la competitividad de Chile en exportación de frutas Orellana, Ariel; Silva, Herman Proyecto (2002)
Integración de genes de lupino en el genoma del trigo, con potencial para movilizar el fosforo inorgánico retenido en los suelos del centro-sur y sur de Chile Peñaloza, Enrique; Silva, Herman Proyecto (2002)
CHARACTERIZATION OF THE ARABIDOPSIS DEFENSE RESPONSE PATHWAY TO BOTRYTIS CINEREA INFECTION. FONDECYT (3990038) Proyecto 1999-2002 Inv. Responsable
The strawberry germplasm resources research based on genomics and metabolomics Silva, Herman; Wang, Jin Proyecto (0)


Breeding in peach, cherry and plum: from a tissue culture, genetic, transcriptomic and genomic perspective Carrasco,Basilio; Meisel, Lee; Gebauer, Marlene; García-Gonzáles, Rolando; Silva, Herman Review ISI SCIELO SCOPUS Biological Research (2013)
Cracking in sweet cherries: A comprehensive review from a physiological, molecular, and genomic perspective Balbontín, Cristián; Ayala, Héctor; M. Bastías, Richard; Tapia, Gerardo; Ellena, Miguel; Torres, Carolina; Yuri, José Antonio; Quero-García, José; Rios, Juan Carlos; Silva, Herman Review ISI SCIELO SCOPUS Chilean Journal of Agricultural Research (2013)
Proteomic analysis of peach fruit mesocarp softening and chilling injury using difference gel electrophoresis (DIGE) Nilo R.; Saffie C; Lilley K; Baeza-Yates, R; Cambiazo, V; Campos-Vargas, R; Gonzalez, M.; Meisel LA; Retamales J.; Silva H.; Orellana, A Review ISI SCOPUS BMC Genomics (2010)
JUICE: a data management system that facilitates the analysis of large volumes of information in an EST project workflow Latorre, M; Silva H.; Saba J.; Guziolowski, C; Vizoso P.; Martínez V; Maldonado J.; Morales A.; Caroca R.; Cambiazo, V; Campos-Vargas, R; Gonzalez, M.; Orellana, A; Retamales J.; Meisel LA Review ISI SCOPUS BMC BIOINFORMATICS (2006)

149

Herman Silva

Professor

Departamento de Produccion Agricola

Universidad de Chile

Santiago, Chile

Lee Meisel

Associate Professor

Institute of Nutrition and Food Technology (INTA), University of Chile

Macul, Chile

JONATHAN MALDONADO

Postdoc CONICYT

Dpto. Genética Molecular y Microbiología

Pontificia Universidad Católica de Chile

Santiago, Chile

Basilio Carrasco

Scientific Director

Centro de Estudios en Alimentos Procesados (CEAP)

Talca, Chile

Ariel Orellana

Profesor Titular

Centro de Biotecnologia Vegetal

UNIVERSIDAD ANDRES BELLO

Santiago, Chile

Veronica Cambiazo

Profesora titular

Unidad de Nutrición Básica

UNIVERSIDAD DE CHILE - INTA

Santiago, Chile

Mauricio Gonzalez

Profesor Titular

INTA

UNIVERSIDAD DE CHILE - INSTITUTO DE NUTRICION Y TECNOLOGIA DE ALIMENTOS

Santiago, Chile

Jorge Aedo

Profesor Auxiliar

Biología y Química

Universidad Católica del Maule

Talca, Chile

Andrea Morales

Académico de planta, encargada de Investigación

Salud

Universidad Santo Tomas

La Serena, Chile

Alfredo Molina

UNIVERSIDAD ANDRES BELLO

SANTIAGO, Chile

Juan Valdés

Head lab

Ciencias Biologicas

UNIVERSIDAD ANDRÉS BELLO

Santiago, Chile

Lorena Marchant

Director

innovación y desarrollo

Botania SpA

Santiago, Chile

Cristian Gallardo

Profesor Asociado

Departamento de Oceanografía

Universidad de Concepción

Concepcion, Chile

Karina Ruiz

Profesora asociada

Carrera Quimica y Farmacia

Universidad Arturo Prat

Iquique, Chile

Andrés Tittarelli

Profesor Asociado

Instituto Universitario de Investigación y Desarrollo Tecnológico (IDT)

Universidad Tecnológica Metropolitana

Santiago, Chile

Lorena Norambuena

Full Professor

Biology

UNIVERSIDAD DE CHILE

Santiago, Chile

Gaston Muñoz

assistant professor

Ciencias Biologicas

Universidad San Sebastian

Valdivia, Chile

Claudio Meneses

Profesor Asociado

Facultad de Agronomía e Ingeniería Forestal/ Facultad de Ciencias Biológicas

Pontificia Universidad Católica de Chile

Santiago, Chile

Juan Rios

Postdoctorante

Biología

Universidad Andres Bello

Santiago, Chile

Bárbara Arévalo

Investigador

Investigación

Centro de Estudios de Alimentos Procesados

Talca, Chile

Marlene Gebauer

Profesor Asistente

Departamento de Ciencias Vegetales

PONTIFICIA UNIVERSIDAD CATOLICA DE CHILE (PUC)

Santiago, Chile

Juan Manuel Estrada

Director

Facultad de Ecología y Recursos Naturales

Universidad Andrés Bello

Quintay , Chile

José Pérez

Investigador Asociado

Centro de Estudios en Alimentos Procesados

Talca, Chile

Sergio Diez de Medina

Co Fundador

I+D

Grupo SIBI

Santiago, Chile

PAULA VIZOSO

Researcher

Universidad Mayor

SANTIAGO, Chile

Carolina Klagges

Profesor titular

I3CBSEK

Universidad SEK

santiago, Chile

Eduardo Gratacos

Director

Centro Ceres

Quillota, Chile

VILBETT BRIONES

Académico/Director de Escuela

Ingeniería en Alimentos

UNIVERSIDAD DE LA SERENA

la serena, Chile

Claudia Stange

Titular Professor

Department of Biology

UNIVERSIDAD DE CHILE

Santiago, Chile

Andres Zurita

Investigador

Instituto de Investigaciones Agropecuarias - INIA

La Serena, Chile

Carole Díaz

Coordinadora de Desarrollos Tecnológicos

Universidad Santo Tomás

Santiago, Chile

Luisa Bascuñán

Profesora asistente

Botánica

Universidad de Concepción

Concepción, Chile

Máximo González

Investigador

Biotecnología

Centro de Estudios Avanzados en Zonas Aridas

La Serena, Chile

Ninoska Delgado

Investigador Postdoctoral

Escuela Ingeniería en Medioambiente

Universidad de Valparaíso

Valparaiso, Chile

Sebastian Boltana

Profesor Asociado

Occeanografia

Universidad de Concepcion

Concpecion, Chile

Daniela Urbina

Profesor Instructor

Facultad de recursos naturales renovables

Universidad Arturo Prat

iquique, Chile

Cristian Balbontin

Investigador

Produccion Vegetal

Instituto de Investigaciones Agropecuarias

Chillán, Chile

Raúl Herrera

Académico

Biología Molecular y Biotecnología

Universidad de Talca

Talca, Chile

Reinaldo Campos

Titular Professor

Producción Agrícola

Universidad de Chile

Santiago, Chile

ERIKA SALAZAR

INVESTIGADORA

INSTITUTO DE INVESTIGACIONES AGROPECUARIAS INIA LA PLATINA

SANTIAGO, Chile

Peter Caligari

Science Advisor

CGNA

Temuco, Chile

Igor Pacheco

Profesor Asistente

Laboratorio de Bioinformática y Expresión Génica

INTA - Universidad de Chile

Santiago, Chile

Haroldo Salvo

Director

Plant Science

CGNA

Temuco, Chile

Jose Yuri

Profesor Titular y Director del Centro de Pomáceas

Producción Agrícola

UNIVERSIDAD DE TALCA

Talca, Chile

Rosa Scherson

Associate Professor

Departamento de Silvicultura y Conservación de la Naturaleza

Universidad de Chile

Santiago, Chile

Federico Luebert

Full Professor

Universidad de Chile

Santiago, Chile

Carolina Sanhueza

Académico e investigador

Ciencias y tecnología vegetal

Universidad de Concepción

Los Angeles, Chile

Rodrigo Hasbun

Profesor asociado

Silvicultura

Universidad de Concepción

Concepcion, Chile

Héctor Duchens

DIRECTOR COMERCIAL

COMERCIAL

GRUPO SIBI SPA

santiago, Chile

RICHARD BASTIAS

Associate Professor

Crop Production

UNIVERSIDAD DE CONCEPCIÓN

Chillán , Chile

Karen Mujica

R&D Analyst

Diagnostico Molecular

PhageLab

santiago, Chile

Claudio Ponce

Data Engineer

FRANKLES SPA

Santiago, Chile

Marco Garrido

Académico

Agronomía

Universidad de La Serena

Ovalle, Chile

Cesar Ramirez

Director

Engineering and projects

Alto Verde engineering and projects

Arica, Chile

Gustavo Lobos

Associate Professor

Horticulture

FACULTDAD DE CIENCIAS AGRARIAS, UNIVERSIDAD DE TALCA

Talca, Chile

Yohaily Rodríguez

Asistente de Investigación

Departamento de Ciencias Vegetales

Pontificia Universidad Católica de Chile

Santiago, Chile

Andrea Plaza

Investigadora

CENTRO DE ESTUDIOS EN ALIMENTOS PROCESADOS

Talca, Chile

Eduardo Agosin

Full Professor

Chemical and Bioprocess Engineering

PONTIFICIA UNIVERSIDAD CATOLICA DE CHILE

Santiago, Chile

Mónica Flores

Asistente investigación

Producción agrícola

Universidad de Chile

Santiago, Chile

Carolina Torres

Professor/Researcher

Facultad de Ciencias Agrarias

UNIVERSIDAD DE TALCA

Talca, Chile

Gerardo Tapia

Encargado Recursos Geneticos Vegetales

Instituto de investigaciones agropecuarias, INIA

Chillán, Chile

Katherine Márquez

Researcher

Researcher

Centro de Estudios en Alimentos Procesados

Talca, Chile

Daniela Arias

Investigadora postdoctoral

Biología

Universidad de Chile

santiago, Chile

Leonardo Pavez

Profesor Asociado

Instituto de Ciencias Naturales

Universidad de Las Américas

Santiago, Chile

Luis Milla

Profesor Asistente

Escuela de Medicina

Universidad de Santiago

Santiago, Chile

Carlos Salas

Gerente de Innovación y Desarrollo

Vivero del Maipo Ltda.

San José de Maipo, Chile

Andrés Schwember

Profesor Asociado

Ciencias Vegetales

PONTIFICIA UNIVERSIDAD CATÓLICA DE CHILE

Santiago, Chile

Denisse Zamorano

INVESTIGADORA POSTDOCTORAL

CIENCIAS QUIMICAS

Universidad de La Frontera

TEMUCO, Chile

Herman Silva Ascencio

Líneas de Investigación

Educación

Licenciate in Biochemistry, UNIVERSIDAD DE CONCEPCION. Chile, 1987

Biochemist, UNIVERSIDAD DE CONCEPCION. Chile, 1988

Ph. D., Plant Biology, Rutgers, The State University of New Jersey. Estados Unidos, 1998

Experiencia Académica

Professor Full Time

Experiencia Profesional

Associate Professor Full Time

Assistant Professor Full Time

Ph. D. Student Full Time

Senior Lab Technician Full Time

Instructor Part Time

Associate Professor Full Time

Formación de Capital Humano

Difusión y Transferencia

Premios y Distinciones

Academic Forum Chile - Japan 2014

Fellowship to attend to RGC7 (7th International Rosaceae Genomics Conference). Seattle, WA

Associate Editor

Article (63)

Abstract (1)

BookSection (2)

ConferencePaper (13)

ConferencePoster (51)